Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0772 ATGGAGTGGACTAGAGGCCTCATCATAGGACGTGGCTCATCAGCCACCGTGTACACCGCCATCTCCTCCCACTCCTCCACCGTCGCCGCCGTCAAGTCGGCAGAGCTATCACTAACAAACTCAGAACAGCTGCAGAGAGAACAGAGGATTCTGTCTTCTCTGTTTTCTCCCCACATAGTTACCTACAAAGGGTGTAACATCACAAAGGAAAACAACACCCTGTGGTTTAACCTCTTCATGGAGTACATGCCCTTTGGCACTCTCTTGCAGGAAAGTCGCCGGCACGGTGGCCGGCTCAGCGAGCCGGCCATCGTGCACTACACGCGACAAGTCCTGCAGGGGCTAGAGTACTTGCACACAAAGGGTGTTGTGCATTGCGATGTTAAAGGTAGCAACATTTTGATTGGTGAAGATGGGGCCAAGATTGGAGACTTTGGATGTGCCAAGTATGCGAATGAGTCTTTGGCCACTACCGGCGGCACGCCGATGTTCATGGCGCCAGAGGTGGCGAATGGGGAGGAGCAGGGGTGCCCTGCTGATGTGTGGGCACTTGGGTGCACTGTGGTTGAAATGGCCACTGGGTTTGCACCGTGGCCTAATGTGGAAGACCCTGTCACAGTGTTGTACCGTGTTGCATATTCCGATGAGTTGCCGGAGATTCCTTGTTTTCTGTCTGAGGAAGCAAAGGATTTCTTGGGGAAGTGTTTTAGGAGGAATCCTAAGGAGAGGTGGACTTGTAGTCAACTTCTGAAGCATCCATTTCTTGGGGAATTCAGTTCCAATGATAAGGAAGTTGAAGAATCTAATTCAAGTTCTCCAACAAGTATTCTTGAGCAGGGCTTTTGGAATTCTGTTGAAGAGGCAGAGGCAGAGTGTGTCTCTGGCAATGTGGTTCAGAAAAGTTTTGAGGATTCTCCTAAGGTAGGATCAGCAAGCTAG 939 0.5069 MEWTRGLIIGRGSSATVYTAISSHSSTVAAVKSAELSLTNSEQLQREQRILSSLFSPHIVTYKGCNITKENNTLWFNLFMEYMPFGTLLQESRRHGGRLSEPAIVHYTRQVLQGLEYLHTKGVVHCDVKGSNILIGEDGAKIGDFGCAKYANESLATTGGTPMFMAPEVANGEEQGCPADVWALGCTVVEMATGFAPWPNVEDPVTVLYRVAYSDELPEIPCFLSEEAKDFLGKCFRRNPKERWTCSQLLKHPFLGEFSSNDKEVEESNSSSPTSILEQGFWNSVEEAEAECVSGNVVQKSFEDSPKVGSAS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0772 312 Pfam Protein kinase domain 8 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0772 312 SUPERFAMILY Protein kinase-like (PK-like) 6 265 IPR011009 -
Ssu8g0772 312 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0772 312 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Ssu8g0772 312 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Ssu8g0772 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Ssu8g0772 312 PANTHER MAP KINASE KINASE KINASE 1 307 - -
Ssu8g0772 312 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 307 - -
Ssu8g0772 312 CDD STKc_MAPKKK 2 255 - -
Ssu8g0772 312 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0772 Ssu-Chr8 12607685 12608623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0772 1 285 MAP Kinase Kinase Kinase AT2G32510 55.102 1.12e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu8g0772 Pkinase 1.6e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0772 K20716 - gmx:100797801 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0772 8 12607685 12608623 Ssu8g0772 8 12607685 12608623 ECH
Ssu8g0772 8 12607685 12608623 Ssu3g2268 3 72779539 72780696 PCT