Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0392 ATGGGCGAAATCGAAGAAATTGGAGCTGATGTCTGCTCGGATATAGAAGTTGATGATATTAGATGTCCCAATATAGCAGAGAAAGATGTCAGCGATGAAGAGATTGAAACAGAAGAATTGGAGCAGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTGAAGGAAAAACAGAAGCTTGCGGCACAGCAAGCCGCAGAAAAGCAAAAGCCAAGGCAGTCCAGTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTCATGGAAGTCTGCAAAGCTCAAGGATTTGTGTACGGTATCATTCCTGAGAAGGGAAAACCAGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAGGAGAAAGTAAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCGGAGTGTCTTGCTATGAGTGAGGCCGATAATAGCCGAAACGGTAACTCTCAGAGCATTCTCCAAGACCTGCAAGATGCAACACTCGGATCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTGTACCCCCACCTTGGTGGCCAACTGGGAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTTACTGCTGTTATAAAGCACATGTCACCTAACATTGCTAAGATAAGGAGGCATGTCCGCCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTAGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGATAATGGTACATCTGGAATAACTGGAATGCCACCTGGTGTTCCTGTTGAGAATAAGCAAGCTGCTACTAGTAGTGCTAGCAACTATGATGTTGATGGTGCTGATGATGGTGTTGGTTCGGTTTCTTCTAAAGAAGATAGGAGAAATCAGTTTATGGATACCGAACCATCAGATAACTTGCGCAGGGTTAGGAATTCTGTCCAAGATACAGATCAAGCAAAGAAGCAACCCAAGAGAAAAAGACCCCGATTGAGGTCAAGTGCCATTGACAAACCATCAGCGCAATCTGACAATGAAATTTTACATGATGCACCAAGAAGCAAAGGACTTAATATGAACCAGACAGAAGCACAGGTAGTTGGAGTCCACATTCATGGAAATGAACAGTGCAACGAGACAGATTCTGCTGCAAGACCACTGGACAAAGGACTTGAGGTGCCCACACAACTACCAGCACCTGAGTTTGATCATTACTCTTATTTACATACAAACAACTTACTTTCCTCAGAAAGCATGTATATGAGTGGAAGGCCAATGCACTATCCTGAGTTGCAAAGCCCCGACATGCATCATGAAACCACTTATAATCTTTATAATCCAGCAGCAGGATATGAGCCTGGTCAGGATGGGCAGCAGCTACAGTCTGGTAACAATGAAACAGTTAGGCCAGAGAATGATGCAGTTTCTATGCAAGCAGTGCATAGGGATGAAATTACTGGAGGAGACTTGCAATATTTTGGTAAAGATGCATTTCAAAATGAGCTTGATAGACCTATGGATCACACTTTCTTTGGATCACCGCTTAGTAGCATGTCATTAGATTTTGGAGGACTTAACAGTCCATTCCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1779 0.4317 MGEIEEIGADVCSDIEVDDIRCPNIAEKDVSDEEIETEELEQRMWKDRIKLKRLKEKQKLAAQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKAQGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGITGMPPGVPVENKQAATSSASNYDVDGADDGVGSVSSKEDRRNQFMDTEPSDNLRRVRNSVQDTDQAKKQPKRKRPRLRSSAIDKPSAQSDNEILHDAPRSKGLNMNQTEAQVVGVHIHGNEQCNETDSAARPLDKGLEVPTQLPAPEFDHYSYLHTNNLLSSESMYMSGRPMHYPELQSPDMHHETTYNLYNPAAGYEPGQDGQQLQSGNNETVRPENDAVSMQAVHRDEITGGDLQYFGKDAFQNELDRPMDHTFFGSPLSSMSLDFGGLNSPFHLDDFLGDDEMIQYFGA 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0392 592 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Ssu8g0392 592 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Ssu8g0392 592 Coils Coil 37 57 - -
Ssu8g0392 592 MobiDBLite consensus disorder prediction 491 516 - -
Ssu8g0392 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 590 IPR006957 GO:0005634
Ssu8g0392 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 590 - -
Ssu8g0392 592 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Ssu8g0392 592 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Ssu8g0392 592 MobiDBLite consensus disorder prediction 60 83 - -
Ssu8g0392 592 MobiDBLite consensus disorder prediction 289 405 - -
Ssu8g0392 592 MobiDBLite consensus disorder prediction 332 369 - -
Ssu8g0392 592 MobiDBLite consensus disorder prediction 501 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0392 Ssu-Chr8 6307624 6310086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0392 16 575 EIL Transcription Factor Family AT1G73730 54.116 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Ssu8g0392 EIN3 7.4e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0392 8 6307624 6310086 Ssu8g0392 8 6307624 6310086 ECH