Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2561 ATGATGGACTCGCACAAGCAACTATTTTCCCTCTTACGTCTTCCCCTAGTTCTTCTACTTCTCTCAGGACATATGGGGCTGCAATTAGCTGAGGCTCGGATACAACGTGATGAGACGAATTATCCCCCGAAAATGTTGTTCGTTTTTGGGGACTCATATGCTGATACTGGGAACACGAGAATAGATCAACCTGGTTCGTGGAAACAGCCTTATGGCATCACTTTTCCCGGAAAACCAGCCGGTAGATTCTCCGACGGTAGAGTTCTGACCGATTACATTGCTACGTATTTGGGACTCAAATCGCCCGTTCCCTATAAATTTAGGAAACTGATGCAGCAACGTTTGAAATACGGGATGAATTTTGCATTTGGTGGTACCGGTGTATTTGACACATCCTCCAAAAACCCAAATATGACAATCCAAATAGATTTCTTCAAGCAGTTGATCAAAGAAAATATGTACACCACCTCAGATCTCAGCAACTCAGTGGCCCTCGCCTCCGTCGCCGGAAATGATTACAATTACTACTTGGCCACAAATGGCTCAATTGAGGGTTTCCCGTCTTTCATCGCCTCAGTGGTTAATCAAACTGTCACCAACTTGCTTCGCATCCAAAGGTTGGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCGCTTGGATGTCTTCCTAGTTCCACAGCCCAATCCTCATTCAAACAATGTAATAGTACCTTCAACGACCTCGTAGTTCTCCACAACAATCTTTTGAACCAAGCTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTGACCTTTACGACACCTTCATGTCAGTGCTGAACCATCCATCTACCAATAACATTACGGACCAGCTCAAGCCTTGCTGCTTTGGGCTAAGCAGCCAGTATTCTTGTGGAAGCGTGGACGAGAACAATGTTAAGAAATATAAGGTTTGTGAGCATCCCACATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCAGGCCGTGTATAACAAGTTGCAAACGACGAGTGCTCTTCATCAAATCCGATACTAG 1071 0.451 MMDSHKQLFSLLRLPLVLLLLSGHMGLQLAEARIQRDETNYPPKMLFVFGDSYADTGNTRIDQPGSWKQPYGITFPGKPAGRFSDGRVLTDYIATYLGLKSPVPYKFRKLMQQRLKYGMNFAFGGTGVFDTSSKNPNMTIQIDFFKQLIKENMYTTSDLSNSVALASVAGNDYNYYLATNGSIEGFPSFIASVVNQTVTNLLRIQRLGVRKIVVGGLQPLGCLPSSTAQSSFKQCNSTFNDLVVLHNNLLNQAVTKLNQQTKDHSTFIVLDLYDTFMSVLNHPSTNNITDQLKPCCFGLSSQYSCGSVDENNVKKYKVCEHPTSAFFWDLLHPTQAGWQAVYNKLQTTSALHQIRY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2561 356 Pfam GDSL-like Lipase/Acylhydrolase 46 344 IPR001087 GO:0016788
Ssu7g2561 356 PANTHER OSJNBB0059K02.9 PROTEIN 1 356 - -
Ssu7g2561 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 356 - -
Ssu7g2561 356 SUPERFAMILY SGNH hydrolase 43 345 - -
Ssu7g2561 356 CDD SGNH_plant_lipase_like 46 345 IPR035669 -
Ssu7g2561 356 Gene3D SGNH hydrolase 35 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2561 Ssu-Chr7 50543431 50546714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2561 38 341 Pollen Coat Proteome AT1G75930 30.675 1.34e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2561 - - gmx:100789208 588.956