Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1348 ATGTCTGGAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAATGGTACCACTTCACTGCTATTGTGATTGCTGGAATGGGGTTCTTCACTGATGCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAGTTGTTGGGGAGGATATATTACACAGACATAAGCAAACCGAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCTGTGACTGGTGTTGCACTATGTGGCACTTTGGCCGGCCAGCTTTTCTTTGGATGGCTTGGTGACAAGATGGGAAGGAAAAAGGTTTATGGCATAACTCTTATGCTCATGGTTGTGTGTTCCATTGCCTCGGGGCTCTCTTTTGGAGATACCCCCAACAGTGTCATTGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGCATTGGTGGTGACTACCCTCTATCAGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGGATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACAAGCTTCCTAGTtatgaagaaaacaaaacaggATCAATAGTGCATTCCCTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTCCCAGCTGCGCTTACTTACTACTGGCGAATGAAGATGCCAGAGACAGCTCGTTACACGGCCCTTGTAGCTAGAAATGCAAAACAAGCCGCTTCAGACATGTCTAAGGTGTTGCAAGTTGAGCTTGAAGCTGAAGAGGATAAGTTGCAGCATATTGTTGAGAATGATAACCAAAGGTATGGTTTGTTCAGCAAGGAATTTGCCAAACGCCATGGACTGCACTTGGTGGGAACCGCAGTTACTTGGTTCTTATTGGACATTGCCTTCTATAGCCAGAACCTTTTCCAAAAGGACATTTTCACTGCCATTGGATGGATCCCTCCTTCACAACAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGTACTGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGCCGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCTATACCTTACAATCACTGGAGCAAGAAAGACAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACCTTCTTCTTCTCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAAAGTAAGGACCCCTCCAAGACTGATCCAGGTTACCCAACTGGTATTGGGGTTAAGAACTCCCTCATTATGCTTGGCGTGATCAACTTCTTTGGAATGGTATTCACCTTGTTAGTACCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTggggagaatgaagaagatgGTCCTGAGGCTATAGAGATAGCAGGGTCTGCCAGGACGGTTCCAGTTTAA 1614 0.4436 MSGGQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDISKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKMGRKKVYGITLMLMVVCSIASGLSFGDTPNSVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYKLPSYEENKTGSIVHSLDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVELEAEEDKLQHIVENDNQRYGLFSKEFAKRHGLHLVGTAVTWFLLDIAFYSQNLFQKDIFTAIGWIPPSQQMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWSKKDNRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDPGYPTGIGVKNSLIMLGVINFFGMVFTLLVPESKGKSLEELSGENEEDGPEAIEIAGSARTVPV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1348 537 Gene3D MFS general substrate transporter like domains 273 529 IPR036259 -
Ssu7g1348 537 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Ssu7g1348 537 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ssu7g1348 537 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Ssu7g1348 537 MobiDBLite consensus disorder prediction 512 537 - -
Ssu7g1348 537 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 529 - -
Ssu7g1348 537 CDD MFS_PhT 25 507 - -
Ssu7g1348 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 529 - -
Ssu7g1348 537 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Ssu7g1348 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1348 Ssu-Chr7 29148965 29150578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1348 1 521 Inorganic Solute Cotransporters AT3G54700 79.846 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1348 K08176 - gmx:100802890 995.342