Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0995 ATGCCAGTGCCCCCCAAATCCATCTACACCTTCACCATCACAGTCATGCTCGCCTTCaccttcctccttctcttcttctCCGGCTTCCTCCACTTCCCCTCCGTTTCCTCCTCTTTCCCTCCCGTCGCCCGCCCCGTGACGCCGCGGGCGGCGGAGCCCTTCACCGATCTGGTGGGCGCCTTCAGGAAATGGGACTCGCGAGTGGGTTGCGCTCGCTTCAGGGAGAAACCGAGTGGGGTGTCTCGGAACCAGTCAAAGGTCGCTTCTTTGCAGGAGATTGGCGCCTGTGGGGGCTTGAAACTGAACCATGTCAGTGTTTTGGTCAGAGGGTGGACTTGGATCCCGGATAACTTGGATAACTTGTACTCGTGCGATTGTGGGTTGAGCTGCTTGTGGACCAAATCGCCCGTTCTCGCTGACAAGCCTGATGCTTTGCTGTTTGAATCGTCCACGCCTCCGGTTCAGagACGCATGGGAGAACCTCTTCGTGTATATATGGATCTCGAAGCTGGCCGAAAGAGATCAGGTCGAGAggatatatttattagttatcaTGCTGAGGATGATGTACAGTCAACCTACGCTGGTGCGCTCTTTCACAACGGTCGAAATTACCACATCTCCAACAATAAAAACAGTGACATACTTGTTTATTGGTCTTCATCACGGTGTCTTTCCCAAAGGAATGAACTCGCCAAGAAACTCCTTGGCCTACTGCCGCATCATTCATTTGGCAAGTGTCTAAATAATGTTGGTGGTCTAGACATGGCTCTTTCTCTTTATCCCGAATGTGCAAATGATGCCAATGTTACACCAAAATGGTGGGATCATTTACATTGCGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTAGTGAGAGTTACGTGACAGAGAAATTATTCTATGCCTTAGACTCTGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAGCTCGTTGGAAGAGCTGGCTTCACACGTGAAGGCCGTGGCCAATGACCCGGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTACTGGGTAACTATGGAAAAACCCGAGCCGTGAGCCTCGACACGTTGCCATGCCGATTATGTGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCACGAAGCTAG 1206 0.4842 MPVPPKSIYTFTITVMLAFTFLLLFFSGFLHFPSVSSSFPPVARPVTPRAAEPFTDLVGAFRKWDSRVGCARFREKPSGVSRNQSKVASLQEIGACGGLKLNHVSVLVRGWTWIPDNLDNLYSCDCGLSCLWTKSPVLADKPDALLFESSTPPVQRRMGEPLRVYMDLEAGRKRSGREDIFISYHAEDDVQSTYAGALFHNGRNYHISNNKNSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFSESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFSSLEELASHVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAVSLDTLPCRLCEAVSRKGGRNARS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0995 401 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 14 400 IPR001503 GO:0006486|GO:0008417|GO:0016020
Ssu7g0995 401 PIRSF FucT_plant 3 401 IPR017177 -
Ssu7g0995 401 Gene3D - 165 368 IPR038577 -
Ssu7g0995 401 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 14 400 - -
Ssu7g0995 401 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 393 - -
Ssu7g0995 401 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 215 394 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0995 Ssu-Chr7 21944780 21948740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0995 3 399 Xyloglucan Fucosyltransferase1 AT1G71990 68.500 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0995 K14412 - gmx:100791990 729.169