Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0433 ATGACTAAAGACGAGGACTTTAAGCTCCTGAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCTGAGCAGCAGAAAGTAACAGTTTCAGGTAGTGTGGATTCTGCAACTTTGATCAAGAAACTGGTCAGAGCTGGTAAATATGCTGAACTCTGGTCTCAGAAATCAAATCAGAACCAAAAGCAGAACAACAGCAATGCCAAAGATGACAAGAACAAAGGACAAAAGCAAGGACTGGTGAAGGGGCTTGAGGCCTTCAAAAACCAGCAGAAATTTCCTGCTTTTATTTCTGAAGAGGATGAATACTACTCTGAATATGATGACGACGACGAGGACGAAGATGAAGAGATGCGGTTTCTCAGGGAGAAAGCCAATCAACTGCAAATGCTCAAGCAGCAAGCAGCTAATGCAAATAATGTGAGAAAAGGTGTAGGAGCCATTTCAGGTGCCACCAATGGTAAGATGAACAATGGTGGCAATGCCAATAGTGGAAAGAAAGGAGGCCCAAATCAGAATGTGGGAATGAAAGACAGTCCTAATGGGTTTGATCAGAAAACCATGGCAGCTCTTAAGTTGAACAGTGCCCACCTGGGTGGTGAAGGCCTCAACCTCAATCTTGGTGAAGCCAAAAGGCCCAATGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGTAATGGTGCTAATGTTGGTAGTGCCACCGTTCTAGGGGTTAATAATTCCAATGGTTTGGGGGGTTTTCCTGTTCAGTCCAATAATATGATTCCAGGATCCTCTACAGCAGCTTTTTCAAATGGTGGTCTTGCTGCTGGCCAATATCCATCTTCTCTGCTAATGAACATGAATGGCTTCAATAACCATCCATCCCCATCTCCATTAATGATGAACATGAACATGCAGGCCAGGCCAGCCATGCAGCAACAACCCCAGATGATGTATCACAGGTCTCCTTTTATTCCCCCTAACACTGGCTATTATCACAATCACAGTAGCTACAGCCCTGCACATTACTCCTCCTATTCCTATGGCTTGCCTAGTTACCCTGGTGGTGATGACCACTCTGCAGCTCACATGTTCAGTGATGACAATACGAACAGCAGCTGTTCAATAATGTAA 1194 0.4372 MTKDEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKSNQNQKQNNSNAKDDKNKGQKQGLVKGLEAFKNQQKFPAFISEEDEYYSEYDDDDEDEDEEMRFLREKANQLQMLKQQAANANNVRKGVGAISGATNGKMNNGGNANSGKKGGPNQNVGMKDSPNGFDQKTMAALKLNSAHLGGEGLNLNLGEAKRPNDIGAMMNLAGFNGNGANVGSATVLGVNNSNGLGGFPVQSNNMIPGSSTAAFSNGGLAAGQYPSSLLMNMNGFNNHPSPSPLMMNMNMQARPAMQQQPQMMYHRSPFIPPNTGYYHNHSSYSPAHYSSYSYGLPSYPGGDDHSAAHMFSDDNTNSSCSIM 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0433 397 MobiDBLite consensus disorder prediction 171 207 - -
Ssu7g0433 397 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Ssu7g0433 397 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 397 - -
Ssu7g0433 397 MobiDBLite consensus disorder prediction 175 204 - -
Ssu7g0433 397 Gene3D - 12 84 - -
Ssu7g0433 397 MobiDBLite consensus disorder prediction 78 100 - -
Ssu7g0433 397 CDD HMA 16 75 IPR006121 GO:0046872
Ssu7g0433 397 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Ssu7g0433 397 Coils Coil 82 102 - -
Ssu7g0433 397 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 397 - -
Ssu7g0433 397 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Ssu7g0433 397 Coils Coil 142 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0433 Ssu-Chr7 8192664 8194720 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0433 7 8192664 8194720 Ssu7g0433 7 8192664 8194720 ECH