Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0427 ATGGGAGCTGAGAGGAAATGGCTTTTGACGCTGTTCAGTGCAGCGTTTTTATCTCTCATGCTTCTGTTGATGTCTTCTTTCTCTGCCTTTAGCTCCCCAAAGGCTTTCCCTTCCCTTGTTCAGCATGGTTCTCACTACCCTCCAGCTTTTGCATACTTTATCGCTGGTGGTAACCAAGACAAGGACCGGATCTTGCGTTTGTTGCTGGCAGTTTACCATCCCAGGAATAGGTACCTCCTCCATCTTGGGAGGGATGCTAGGGATGAGGAGAGGCAGGCCCTGGTCGCCGCCGTGAGGGCGGTGCCGGCGATTCGTGCTTTCGGGAACGTGGATGTGGTTGGCAAGGCCGATTATGTCACCTACTTGGGATCCTCCAATGTGGCCATCACTCTCCGGGCTGCGGCCATTATGCTCAAATTGGATAGTGGGTGGAATTGGTTCATCACCTTGAGTGCACGGGATTATCCTCTCATCACTCCGGATGATCTGTCCCACGTTTTCTCTTCTGTTAGGAGAGACCTCAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGGGCGATAGATTCCAGCCCATTGTAGTTGACCCGGGGCTATATTTAGCAAGGAAAAGTCAAATTTTTCAAGCTACAGAGAAGAGGCCAACGCCTAATGCGTTCAAACTCTTCACAGGTTCACCATGGGTCATCTTGAGCCGACCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCACGGACCCTACTGATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATACACCAGAATTTAAGAACACAACAGTAAATGGTGACTTACGATACATGATCTGGGACAGTCCTCCAAAGATGGAACCACAATTCCTTAACACGTCTGTTTACAATCAGATGGTAGAAAGTGGAGCTGCTTTCGCTAGACAGTTTCGACTTAATAATCCTGTGCTGGACATGATTGATGAAAAGATCCTCCAACGTGGGCGCCATCATACTGCCCCAGGAGCGTGGTGCACCGGGCGGAGGAGCTGGTGGGCAGATCCATGCTCCCAGTGGGGTGATGTCAATATTGTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAAGGGTCTGTTTCTAGCCTTCTTGATGACTGGAACTCACAGACCAATCAGTGCCGGTGA 1191 0.4895 MGAERKWLLTLFSAAFLSLMLLLMSSFSAFSSPKAFPSLVQHGSHYPPAFAYFIAGGNQDKDRILRLLLAVYHPRNRYLLHLGRDARDEERQALVAAVRAVPAIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITPDDLSHVFSSVRRDLNFIDHTGDLGWKEGDRFQPIVVDPGLYLARKSQIFQATEKRPTPNAFKLFTGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNTPEFKNTTVNGDLRYMIWDSPPKMEPQFLNTSVYNQMVESGAAFARQFRLNNPVLDMIDEKILQRGRHHTAPGAWCTGRRSWWADPCSQWGDVNIVKPGPQAKKLEGSVSSLLDDWNSQTNQCR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0427 396 Pfam Core-2/I-Branching enzyme 50 309 IPR003406 GO:0016020|GO:0016757
Ssu7g0427 396 PANTHER OS01G0121800 PROTEIN 2 395 - -
Ssu7g0427 396 PANTHER GLYCOSYLTRANSFERASE 2 395 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0427 Ssu-Chr7 8059170 8063555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0427 1 396 Glycosyltransferase AT1G71070 69.192 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0427 7 8059170 8063555 Ssu7g0427 7 8059170 8063555 ECH