Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0421 ATGGCCATTCCCTACCCCCATTTCATCGCCTCCGAGAAAGCGGCGATGGACGCCGGCCTCCTCGCCCCCTCCGTCATCCTCACCCAAGACGACCTCAAGAAGATCGCCGCCTACAAGGCCGTCGAGTACGTCGAGTCGGGCATGGTCCTCGGCCTCGGCACCGGCTCCACCGCCAGGCACGCCGTCGACCGCATCGGCGACCTCCTCCGACAGGGCAAACTGAAAGACATCGTCGGAATCCCCACCTCGAGAAAAACCCACGAGCAGGCCCTCTCCCTCGGGATCCCCCTCTCGGATCTCGACGCCCACCCGGTCGTCGATCTCGCCATCGACGGCGCCGACGAGGTCGACCCCTGCCTCAACCTCGTCAAGGGCCGCGGCGGGTCCCTCCTCAGGGAAAAGATGGTGGAGGGCGCGTGCAAGAAGTTCGTCGTGATCGTCGACGAGTCCAAGATGGTGAACTGTTTGGGGGGCAGCGGGTTGGCCATGCCCGTCGAGGTTATTCAGTTTTGTTGGAGGTTCACTGCGGCGAGGCTGCAGAAGTTGTTCGAGGAGGCCGGGTGCGTTGCGAAGCTCAGGACGGTGAAGGAGGAACCGTTTGTCACGGACAATGGGAACTATATTGTcgatttgtattttaaaaagagtatCGGGGATTTGAAGGCCGCGAGTGACGCGATTCTCCAGCTTTCCGGGGTGGTGGAGCACGGCATGTTTCTGGATATGGCTACCACTGTTATTGTTGCAGGGGAACTTGGCTTGACGGTGAAGAATAAGTAG 780 0.5949 MAIPYPHFIASEKAAMDAGLLAPSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTARHAVDRIGDLLRQGKLKDIVGIPTSRKTHEQALSLGIPLSDLDAHPVVDLAIDGADEVDPCLNLVKGRGGSLLREKMVEGACKKFVVIVDESKMVNCLGGSGLAMPVEVIQFCWRFTAARLQKLFEEAGCVAKLRTVKEEPFVTDNGNYIVDLYFKKSIGDLKAASDAILQLSGVVEHGMFLDMATTVIVAGELGLTVKNK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0421 259 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 161 240 - -
Ssu7g0421 259 Hamap Ribose-5-phosphate isomerase A [rpiA]. 29 257 IPR020672 GO:0004751|GO:0009052
Ssu7g0421 259 Gene3D - 155 237 - -
Ssu7g0421 259 PANTHER ISOMERASE, PUTATIVE-RELATED 1 259 - -
Ssu7g0421 259 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 259 - -
Ssu7g0421 259 CDD RPI_A 32 250 IPR004788 GO:0004751|GO:0009052
Ssu7g0421 259 SUPERFAMILY NagB/RpiA/CoA transferase-like 28 210 IPR037171 -
Ssu7g0421 259 Gene3D - 32 251 - -
Ssu7g0421 259 TIGRFAM rpiA: ribose 5-phosphate isomerase A 32 253 IPR004788 GO:0004751|GO:0009052
Ssu7g0421 259 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 78 251 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0421 Ssu-Chr7 7954233 7955012 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0421 7 7954233 7955012 Ssu7g0421 7 7954233 7955012 ECH
Ssu7g0421 7 7954233 7955012 Ssu2g3184 2 94184976 94186394 PCT