Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0400 ATGGAGCGAGAGAATCACAAGATGAAGGCAGTGAATGTGCTTCGAAGCAGAATCTGTGACCCCAAATTCATCTTCAACGATTCTCCAGACAGCAACTGCAGCAAGCTGAAATTCATGATATCGAGTTCGGTGACGGAGGCGTGTAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGCAAGAACGCGGTTTTGGAGCTTGCCATTCAAGATTTGCTGCAACAGTATCCGGAATCGATTTCAGTGATAAGGTTGAATGGGCTTTTACATAGTGATGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCGAAAGCGGCATCATTTGATGACAACTCCCAATTTGTGGTGGCCATGCTAAAGGAATGTGGATTGGCACataaaacagtaatttttgTTCTGGATGAGTTTGACCTGTTTGCTCAGGGTAAACAGCGGTTACTTTATAGCTTGCTAGATGCAATGCAGTCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCTTACCACCTTCAATGGAAGATTCACAGAGGTTACTGGTGCACATGCTAACATTACCAATCGATTCAAGCTTTCCACATGATTATGCTGTTGAATTTAACAGAAAGGTCCAAAATATTATAGAAGATAGAAGGTTCAGAGAAActctcaataaatatttaaatgttgacTCCTCTGTCAGACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCCTGTCTCAGGAGAACTTTGAAATTGCATTTTCAAGTATCCAGAGGCAGCCGAAACTGGAATGTTTAAGAAATTGCTCCTTTTTAGAACTTCATATATTGGTTTGTATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGagtataaaaatatacataattccTTCCAGTATGCAAGACATGTCTGCTTAAGGGCATTTGAACACCTTCTACATCGTGAATTGATATGTTTCACTGACAATAGAGGACAGAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAAGGACTAAGCGCAAATAACTCATGCCCTGGTTACCTTAAAAAGTTAATCGATCGTGAAGGCTAA 1239 0.3931 MERENHKMKAVNVLRSRICDPKFIFNDSPDSNCSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELAIQDLLQQYPESISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFVVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQRLLVHMLTLPIDSSFPHDYAVEFNRKVQNIIEDRRFRETLNKYLNVDSSVRHLLRFLFCAVSHMDLQTGFLSQENFEIAFSSIQRQPKLECLRNCSFLELHILVCMKRLEVKEQSLCNFNSVMKEYKNIHNSFQYARHVCLRAFEHLLHRELICFTDNRGQSLSVEFRPVKLLISSAELHQGLSANNSCPGYLKKLIDREG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0400 412 Pfam AAA ATPase domain 35 167 IPR041664 -
Ssu7g0400 412 Gene3D - 30 204 IPR027417 -
Ssu7g0400 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 261 IPR027417 -
Ssu7g0400 412 CDD AAA 50 198 - -
Ssu7g0400 412 PIRSF ORC4 2 412 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Ssu7g0400 412 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 213 392 IPR032705 -
Ssu7g0400 412 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 411 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0400 1 409 Core DNA Replication Machinery Family AT2G01120 64.066 0.0 546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0400 7 7128964 7133184 Ssu7g0400 7 7128964 7133184 ECH