Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0398 ATGAGAACAATGGCTGCCACTTTCTCATATCCAGCCTCTACCTACCCTGTAAGGTGTTGTTCCATGAGAGAAAACCATGACCAGCTGAAGCAGCAAGTGAACAACAGTATCAGAACTAATGGGAGTTTTAGGTCCCCATTTAAAGTAGAATCACACAGCCAAACAGCTTCAACTACCACCACTCTTGGTCAAGCTGCTACAATTGGTGAAAATGGTCTGCGCCAAAACATCCCAACAAAGAAGCAATTGGTTGATCCTCATCGTCAAGGGCTCATCATTGAAGGTGGAGTTGGTTATAGACAAACTGTTGTCATTAGGTCCTATGAAGTTGGAGCTGATAAAACTGCAACACTTGAGAGCATCCTCAATCTCCTTCAGGAAACAGCACTAAACCATGTTTGGATGTCTGGACTGCTCGGTGACGGGTTTGGGGCAACACATGGAATGGTGAGGAATGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTACTATCCCATCTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGGATCAGGCAAGAATGGAATGCAGCGGGACTGGCTGATAAGAAGTCAAGCCACGGGCCACATTTTTGCACGTGCAACAAGCACGTGGGTGATGATGAACCGTAAAACAAGACGTCTCTCCAAAATGCCAGAAGAGGTGAGAGCAGAAGTTTCACCTTGGTTTATAGAGAAGCAAGCAATAAAGGAAGATGCTCAAGAAAAAATAGTCAAATTGGACAAAGAGGCTAAATACATGAATTCTGACTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAACATGTTAATAACGTGAAGTATGTAAGATGGATGCTAGAgACCATCCCAGACCAAATTCTAGAGGGGCACCAGTTATCTGGTATCACACTAGAGTACAGAAGGGAGTGTGGAAGCTCAGATATAGTTCAATCACTATGTGAACCTGAAGTTGATGAAATACTTCATGGTGTGGTAGAAACAGATTACTGCACAAATCTTCTCAATGGGTTGTCACTGGCATCATCGAATATTATAAATGGTGGTGGGGTCCTGACTAGCCTTGAGCAGAGGCCAATAAGGTATACACACCTCCTTAAAATCAAAGGAGAGAAACAACGCGACGAAATTGTCAGAGGAATGACTACATGGAAGAGGAAGATCGCTACAATGCCATTTTCCACTTAG 1209 0.4351 MRTMAATFSYPASTYPVRCCSMRENHDQLKQQVNNSIRTNGSFRSPFKVESHSQTASTTTTLGQAATIGENGLRQNIPTKKQLVDPHRQGLIIEGGVGYRQTVVIRSYEVGADKTATLESILNLLQETALNHVWMSGLLGDGFGATHGMVRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGGSGKNGMQRDWLIRSQATGHIFARATSTWVMMNRKTRRLSKMPEEVRAEVSPWFIEKQAIKEDAQEKIVKLDKEAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDQILEGHQLSGITLEYRRECGSSDIVQSLCEPEVDEILHGVVETDYCTNLLNGLSLASSNIINGGGVLTSLEQRPIRYTHLLKIKGEKQRDEIVRGMTTWKRKIATMPFST 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0398 402 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 7 395 - -
Ssu7g0398 402 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 7 395 IPR045023 GO:0006633|GO:0016297
Ssu7g0398 402 Coils Coil 243 263 - -
Ssu7g0398 402 Pfam Acyl-ACP thioesterase 98 332 IPR002864 GO:0006633|GO:0016790
Ssu7g0398 402 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 262 324 IPR029069 -
Ssu7g0398 402 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 98 245 IPR029069 -
Ssu7g0398 402 CDD 4HBT 99 215 - -
Ssu7g0398 402 Gene3D Hotdog Thioesterase 92 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0398 Ssu-Chr7 7101401 7103775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0398 83 402 Acyl Lipid Metabolism Gene Families AT1G08510 47.352 2.14e-98 297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0398 7 7101401 7103775 Ssu7g0398 7 7101401 7103775 ECH