Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0384 ATGGAGAAGGTTTGTGAATTCTGCAAAGCTTTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCGAAGGTGCATTTGGCAAATGCATTGTCTGGCCGGCACCTCCGGACCCTTGTGTGTAACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGTTGCACAACGTTTCTTTACCACATCAGAAACGAGCTATCAGAAGTTTCATGGGGTGCCCTTCTGCCAAAGACTTTGCAGCACTCTGGGGGTTTGAATTGAGTGAGATTGAAAACAGTGCCACTCAGGATCAGTTTGATTCAGTTTCTTGTGTTTCTGCAGATTTGAATGTCGTACAAGTCTCAGGAAAGCCAGGCATTCAAACTGGGGTCCCTTCAATGCTATCTAGGGCCAAATTTGATGGGGGATCGACTAGTCAACAAGGTCAGATATTGTACTGTGATCAAGAGCGACAAACTATTCTGCAGCagattattgatttaaaatggcTTCAACAAAATGAGGAGATTGATTATTCGGCAAAGATCAATAGACTACAAGACAAAGATTTATCTCCTTCAGCATATCATACTCTTAAGAAATTGGACAAAAAATTCAATGAGCAAGCACAAAATTCCCAGGATCTTGCTACTAATGTTCTGGAAAAAGACTGTCCCATTATGGAGCTGAATCCTGAAACTTTGCCTTCTACGTTTTCTCAACTTGAtaatttatcttcttcttcaattatcGATCTTCCGTGGCATGGAGAGTTGTTCTGGACATGCAGAAGTCCACTTCGAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGTGAAGAATTTGTTTGTCAAGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAGTACTGCTTGATGATCAAGATGTCTTCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGACAAGTCAGACATTGACAATCCAAGTGCAATGGAGGATTCTTCAGCCGCTGCATCCATTACTCTCTCCCAATCTATCATGAAAACACGGATATGA 1140 0.3982 MEKVCEFCKALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCGYHLAYVLCLDHKMLICRDCDQKLHNVSLPHQKRAIRSFMGCPSAKDFAALWGFELSEIENSATQDQFDSVSCVSADLNVVQVSGKPGIQTGVPSMLSRAKFDGGSTSQQGQILYCDQERQTILQQIIDLKWLQQNEEIDYSAKINRLQDKDLSPSAYHTLKKLDKKFNEQAQNSQDLATNVLEKDCPIMELNPETLPSTFSQLDNLSSSSIIDLPWHGELFWTCRSPLRSNQLWSQNIQDLGICEEFVCQDDFNIPDVDLTFQNFEELFGGDQDPIRVLLDDQDVFCSSLEKDKSVDKSDIDNPSAMEDSSAAASITLSQSIMKTRI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0384 379 CDD Bbox1_BBX-like 4 47 - -
Ssu7g0384 379 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Ssu7g0384 379 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 374 - -
Ssu7g0384 379 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Ssu7g0384 379 SMART bboxneu5 48 87 IPR000315 GO:0008270
Ssu7g0384 379 SMART bboxneu5 1 47 IPR000315 GO:0008270
Ssu7g0384 379 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0384 Ssu-Chr7 6806917 6811749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0384 1 356 C2C2-CO-like Transcription Factor Family AT1G68190 38.567 6.71e-69 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0384 7 6806917 6811749 Ssu7g0384 7 6806917 6811749 ECH