Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0380 ATGGGCTCTGACAAAATACTCCCATCTCATGTGGTTGCAAATGGACACGCTTCACTTGATTCTGGCCATGCCCGTCTTCGAGAACTCGGTTACAAACAAGAACTCAAGCGCGATCTTTCGGTGATTTCGAACTTCGCGTTTTCGTTTTCTATTATATCAGTGCTGACCGGAGTGACCACCCTTTACAACACGGGGTTGAACTACGGTGGCCCTGTTTCGTTCGTGTATGGGTGGTTTATAGCTTCTGCTTTCACCATGATTGTGGCACTGTCTATGGCTGAGATTTGTTCGTCTTATCCAACTTCTGGTGGGCTTTACTATTGGAGCGCCAAGCTGGCTGGGCCTGGGTGGGCACCCTTTGCTTCCTGGATTACCGGCTGgTTCAATATTGTTGGCCAGTGGGCAGTGACAACAAGTGTAGATTTTTCACTTGCACAACTGATTCAGGTTATTATTCTCCTTAGTACTGGTGGGAAAAATGGTGGTGGATATGAGGCATCTAAATATGTAGTTATTGCTTTCCATGGGGGAATTTTGCTCCTACACGGTATAATAAACAGCCTTCCTATCTCATTGTTATCATTCTTAGGACAACTGGCAGCTATTTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTGTCATTCCATCTGTTGCAACGGAAAGGGCTAGTGCCAAGTTTGTTTTCACTCATTTCAATACTGAAAATAGTGATGGAATCAGCAGCAGACCCTACATATTTCTCTTGGGACTTCTAATGAGTCAGTATACCCTAACTGGCTTTGATGCATCAGCTCACATGACAGAGGAAACCAAGGATGCTGATAGAAATGGACCAAAAGGAATTATTAGCGCTGTTGGGATATCCATCGTTGTTGGATGGGTTTACATACTAGGCATTACCTTTGCAGTCACTGACATCCTTTTCCTTTTGAGCGGAGATAATGATGCTGGTGGGTATGCCATTGCTGAAGTATTTTATCTAGCATTCAAGAAAAGATATGGCCATGGAACTGGGGGTATTATTTGCTTAGTAATTGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTTCAGTTACCAGCAATTCAAGGATGGCTTATGCTTTCTCTAGAGATGGGGCCATGCCATTGTCATCTTTGTGGCACAAAGTTAACAAGCAGGAAGTCCCCATATATGCAGTTTGGCTTTCCgtttttatatcattttgcATGGCCTTAACgTCTCTTGGAAGCATAGTGGCTTTTGAGGCCATGGTTTCCATAGCAACGATTGGCCTCTATATTGCATATGCGTTACCTATTTTCTTTAGGGTGACCTTGGCAAAGAAGCATTTTATCCATGGGCCTTTCAACTTGGGCCGTTACGGAGTTATTGTGGGCTGGGTTGCTGTTCTTTGGGTGCTGACCATCTCTATACTCTTCTCATTGCCTGTTTCCTACCCAATAACCATAGAGACACTTAACTACACCCCTGTTGCAGTTGGATGTTTGCTTATTCTTGTAGTTGCTTACTGGATAATCAGTGGTCGTCGTTGGTTTAAAGGCCCCATAACCAATATATAA 1563 0.4299 MGSDKILPSHVVANGHASLDSGHARLRELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLNYGGPVSFVYGWFIASAFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEASKYVVIAFHGGILLLHGIINSLPISLLSFLGQLAAIWNVLGVFVLMIVIPSVATERASAKFVFTHFNTENSDGISSRPYIFLLGLLMSQYTLTGFDASAHMTEETKDADRNGPKGIISAVGISIVVGWVYILGITFAVTDILFLLSGDNDAGGYAIAEVFYLAFKKRYGHGTGGIICLVIVAVAIFFCGMSSVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPIYAVWLSVFISFCMALTSLGSIVAFEAMVSIATIGLYIAYALPIFFRVTLAKKHFIHGPFNLGRYGVIVGWVAVLWVLTISILFSLPVSYPITIETLNYTPVAVGCLLILVVAYWIISGRRWFKGPITNI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0380 520 PIRSF AA_transporter 26 516 - -
Ssu7g0380 520 Gene3D Amino acid/polyamine transporter I 33 513 - -
Ssu7g0380 520 Pfam Amino acid permease 39 494 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu7g0380 520 PANTHER AMINO-ACID PERMEASE BAT1 16 520 - -
Ssu7g0380 520 ProSitePatterns Amino acid permeases signature. 69 100 IPR004840 GO:0006865|GO:0016021|GO:0055085
Ssu7g0380 520 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 16 520 - -
Ssu7g0380 520 TIGRFAM 2A0304: amino acid permease 26 516 IPR004756 GO:0006865|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0380 Ssu-Chr7 6759720 6765474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0380 86 520 Organic Solute Cotransporters AT2G01170 76.782 0.0 651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0380 7 6759720 6765474 Ssu7g0380 7 6759720 6765474 ECH