Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0351 ATGGCCTCTGGAGAAGGGAGGCGGCATCATCATGATCTTGTGCCTCTTGCTGCATTGCTcaagagagagatgaagagtgAGAAGATGGAGAAGCCTACTGTGAGGTTTGGACATGCAGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTGATTAAGACTGATTGTCAGCGAGTGCCTGGGAATTCTTCATCATCCTTTTCTGTATTTGCgATCTTTGATGGGCATAATGGAAATGCTGCTGCCATTTTTACTAGGGAGCATTTGTTAAATCACGTGTTGGGTGCTCTACCTCGAGGGCATGGACGAGATGAGTGGTTGCAAGCTTTACCAAGGGCATTGGTTGCTGGGTTTGTTAAAACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACTACAGCCACATTTGTAATAGTGGATAGGTGGACTGTGACTGTTGCATCCGTTGGAGATTCCCGTTGCATACTAGATACCCAGGGTGGTGCTGTTACCAACTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGACTTAGCATTGCTGGTGGTGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTCATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTGCCTCTGATGGCATATGGGATGCTCTATCCTCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACGAGAGGGTTAAAGGACGATACAACTTGCATAGTAGTTGACATAATCCCACCTGATAATGAATTGCCACCTACACCTCCCCCCCAAAAGCGGAACAAGCTGAGAGATCTTCTTTCATTCAGGAAGAGGTCCCGTGATTCTGCTAGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCGATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCAGGGCAATCAACATCTGGCCTTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTTCACGCAGGTTCCATTTTCTCCACCAGCTCCAAACCCTGGCAAGGTCCTTTTCTATGTTCTGATTGCCGTGACAAGAAGGATGCTATGGAAGGAAAACGTCCAAGTGGAGTTAAGGTGTCATAG 1296 0.4522 MASGEGRRHHHDLVPLAALLKREMKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGHGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIAGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPQKRNKLRDLLSFRKRSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRDKKDAMEGKRPSGVKVS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0351 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 430 - -
Ssu7g0351 431 Gene3D - 35 301 IPR036457 -
Ssu7g0351 431 SMART PP2C_4 27 295 IPR001932 -
Ssu7g0351 431 CDD PP2Cc 36 297 IPR001932 -
Ssu7g0351 431 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 430 - -
Ssu7g0351 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Ssu7g0351 431 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Ssu7g0351 431 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Ssu7g0351 431 SMART PP2C_SIG_2 51 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0351 Ssu-Chr7 6291964 6295902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0351 1 430 PP2C-type Phosphatase Gene Family AT1G68410 79.128 0.0 695
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0351 7 6291964 6295902 Ssu7g0351 7 6291964 6295902 ECH