Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0324 ATGAGTCTTTCCATTCTTCAACCTCCCCCGCAGCGCTGCCACTACCACACAAAGCGGTGGCCCCGCATGGACGCGGCCTTCCACCGCCGCAAGGACAAGGTGGTGGTCATCATGGGCGCCACCGGCTCCGGCAAGTCGCGTCTCTCCATCGACCTCGCCACTCTCTTCCCCTTCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCACGGCCTCGACATCACCACCAACAAGATTCCCCACGCGCAGCGCCGCGCCGTCCCCCACCACCTCCTCGGCGACGTCGACCCCTTCCACGGCGAGTTCTCCCCCGCCGACTTCCGCCGCCGCGCCTCCGACCTCATCGCCGACATCACCCGCCGGAAAAACCTCCCCGTCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCGCTCCTCGCCCAAAGCTTCGACCCTCGTTTGAACGCCTTCCACCACGAAGGGATTATATCCTCTGAGCTGAGGTACAGGTGTTGCTTCCTCTGGGTCGACATCGCGTTCCCTGTGTTGTCGGAATATCTGGGGGAGCGAGTAGACGACATGCTCGACTCGGGGATGGTGGACGAGTTGGCTCGGTTCTACGACCCGGACGCGGCGTGTCGAACCGTGTTGGGTCTGAGAAAGGCGATTGGGGTTCCCGAGTTCGACCGGTTTTTTGATAAATACCCGCCTTCGCTGGGCCCGGGGGAGGATCCGCTGCGGGAGCGAGCGTATCGGGAAGCGGTGCAGGGGATTAAGGATAACACGTGTCAGCTGGCGAGGCGGCAGATAGGAAAGATCGAACGGTTGAAGCGCGCCGGCTGGGACCTACAGAGGATCGACGCTACGGAGGCGTTTCGGGTGGTGCTGACCTCAGGGTCCCACGACGCGTCCCATGTATGGGAGAGACTGGTGCTGGAACCAAGCGTGAAGATTGTGAAACGATTCTTGATGGAGTAG 960 0.6156 MSLSILQPPPQRCHYHTKRWPRMDAAFHRRKDKVVVIMGATGSGKSRLSIDLATLFPFSEIINSDKMQVYHGLDITTNKIPHAQRRAVPHHLLGDVDPFHGEFSPADFRRRASDLIADITRRKNLPVVVGGSNSFVHALLAQSFDPRLNAFHHEGIISSELRYRCCFLWVDIAFPVLSEYLGERVDDMLDSGMVDELARFYDPDAACRTVLGLRKAIGVPEFDRFFDKYPPSLGPGEDPLRERAYREAVQGIKDNTCQLARRQIGKIERLKRAGWDLQRIDATEAFRVVLTSGSHDASHVWERLVLEPSVKIVKRFLME 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0324 319 Gene3D - 31 317 IPR027417 -
Ssu7g0324 319 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 24 318 - -
Ssu7g0324 319 Pfam IPP transferase 68 142 - -
Ssu7g0324 319 Pfam IPP transferase 159 264 - -
Ssu7g0324 319 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 318 IPR039657 -
Ssu7g0324 319 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 174 277 - -
Ssu7g0324 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0324 Ssu-Chr7 5561672 5562631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0324 37 208 C2H2 Transcription Factor Family AT2G27760 39.535 1.29e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0324 7 5561672 5562631 Ssu7g0324 7 5561672 5562631 ECH