Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0322 ATGTCACTTCTTAACCAGCTCTTTAACAGAGGCGTTTTCGCCACTCGATGCAAAACATGCCTTAACCTGGCAATTTCGCGCATTAAGCTGCTACAAAACAAGAGAGATATGCACCTGAAACAAATGCGCAAGGAGATAGGCCAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATTAGGGTGGAGCATATCATACGAGAACAAAATACATGGGCTGCGTATGAAATATTGGAGTTATTCTGTGAATTTGTTCTTGCACGTGTACCTATAATTGAGAACCAGAGGGAGTGTCCCTCGGAATTGCGAGAAGCCATTGCAAGTATAATTTTTGCTGCTCCTAGATGTTCAGATGTACCAGACTTATTGCACATCAAGAACTTGTTTACCACTAAATATGGTAAAGAATTTGTCTCTGCAGCATCTGAACTTCGTCCTGATTCGGGCGTGAACCGCATGATCATTGAAAAGCTTTCAGTTAGTGCTCCATCTGGAGAGGTAAAACTCAAGGTCTTGAGGGAGATTGCAGAAGAATACAATATAACATGGGATTCTTCTAAAACTGAGGCTGAATTTAGGAAAAATCACGAAGATCTCCTGGGTGGAGCAAAGCAAGTTAGTGCTGAAGCTACACTTTCTCATACTCCCAGCAGAAATGGTTCTTCATCACCTTGTATGACGGAACCTTCTATCAAGTCTGTGCATGATAAACAAGAATATAAACGCCTTGAAGCTCCCAGCCCTTCTAACAATAATTCTTGGTTGAATACTAATGAAATTGAACAGTCACACAAAAATAATGATGTCCCCGCTGGAGATGCTAAAAGTGAGACAAGACTTCAATCCTCTGATGTACTGGAGAAGGCGCGGGCTGCCATTGCTTCTGCAGATCGGGCATCAGCAGCTGCTCGTGCTGCTGCTGCACTAGTACAGAGTAATTGGATCATTGAAGCTGGAAGGTGA 963 0.4309 MSLLNQLFNRGVFATRCKTCLNLAISRIKLLQNKRDMHLKQMRKEIGQFLQAGQEAIARIRVEHIIREQNTWAAYEILELFCEFVLARVPIIENQRECPSELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAASELRPDSGVNRMIIEKLSVSAPSGEVKLKVLREIAEEYNITWDSSKTEAEFRKNHEDLLGGAKQVSAEATLSHTPSRNGSSSPCMTEPSIKSVHDKQEYKRLEAPSPSNNNSWLNTNEIEQSHKNNDVPAGDAKSETRLQSSDVLEKARAAIASADRASAAARAAAALVQSNWIIEAGR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0322 320 Gene3D - 5 192 IPR042277 -
Ssu7g0322 320 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 15 310 - -
Ssu7g0322 320 MobiDBLite consensus disorder prediction 264 283 - -
Ssu7g0322 320 MobiDBLite consensus disorder prediction 208 233 - -
Ssu7g0322 320 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Ssu7g0322 320 PANTHER IST1 FAMILY MEMBER 15 310 IPR005061 GO:0015031
Ssu7g0322 320 MobiDBLite consensus disorder prediction 208 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0322 Ssu-Chr7 5452688 5457145 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0322 7 5452688 5457145 Ssu7g0322 7 5452688 5457145 ECH