Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0299 ATGAATAACATAACGCAATCAGAGAGAATGGCCACGAGAGTGGGGTCATTCAGACACAGTTTCTTAGAAAAGAGCAAAGAGAGGCTCCTCCCCAAGAAGGAATACCATGACTTTGGCCTCAACGACGACAATGCCGAAGCCAAGCGTTCCTGCCTCGACGCGCTTTCTGATCGCGTCGTTAGATTCCGCAACGGGTCCAAAGACTTTGCCTCCAAATTGTACGAGATGGGTCGCTCTGACCGACGCAAAGTCGTGTTTGCCATGAAAGCTGGCTTATCCTTAGCCATTGTCTCGCTTTTCATATACATTAAGGAggaacagcttagcaagtattcTATCTGGGCAATCCTCACTGTCGTCGTCGTTTTCGAATTCAGCATAGGTGCAACTCTTAATAAAGGTTTCAATCGCGCTTTGGGAACAGTTTCTGCTGGAGTGCTTGCTCTGGGTATTGCACAGTTAACCGTGTTGGTTGGTCGAGCTTTTGAGGAACTCATTATTgtgttctctatttttattgcTGGTTTTCTTGCGAGCTATGTGAAGCTGTACCCTGCGATGAAGCAATATGAATATGGCTTTCGAGTATTCTTGTTGACATTTTGTATTGTATTAGTGTCTGGGAGACACGGGTTGCAGTTTTTGTCCACAGCTTTTTACAGATTAGTTCTTATTGGTGTTGGTGCTGGTGTAAGTTTATCTGTGAATATTTGCATTTACCCCATCTGGTCTGGGGAGGATCTGCACAAATTGGTGGTGAAAAATTTCAATGGAGTTGCCGCATCTTTAGAAGGTTGTGTAAATGGCTACCTGCAATGCGTTGAATATGAGAGGGTCCCATCCAAAATACTTGTTTATCAAGCCTCTGATGACCCTCTTTACCGTGGTTATAGAACAGCAGTGCAATCGTCAACTCAAGAGGAGACTCTGGTAGATTTTGCATTATGGGAACCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTACGCCAAAGTCAGTGGAGCATTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCGCCTCCGGAAAAGAGGCTGGTTTTCTATGAAGAACTTCAGAGGGTTGGTATTGAAGGAGCTAAAGTATTGCGTCAACTTGGAAGCAAAGTGGAAAGGATGGAAAAGCTAAGCAAAAGTGACATTCTCTTAGATGTTCACGAGGCAGCTGAGCAATTGCAGATGAAGATTGACCGATTGTCATTCCTTCTAGTCAATTCAGAGAGCTGGGAAGCTGTAAGACATCATGGAGAAAATGAACATCCTGACAATTTGATTGATGTTAAAGACAATGAGAACAAGCAACCCGAGATCACTTCCCTCAATGAAGTAGGGGATGATCCAAAACTTGATATAAGAATAGAGCCTTCCGTGCCAGAACCCAGTTTGTCACAGACCGCGACCAAGAGCTTTCTGTCACGGGCACATCTTTCTTTTTTCGCAGATGGGATAGTAAATGAGCCAGAATCCAGAGTGTATGAAAGTGCCAGCTCCTTGTCTTTGGCAACATTTGCTTCAAATTTAATCGAGTTTGTTGCGAGGCTTCAAAATCTTGCGGATGAATTCCAAGATCTTAGTGAGAAGGCGAATTTTAAAGACCCCCTTGAACAACCGTTGTTAAAGTAG 1683 0.4296 MNNITQSERMATRVGSFRHSFLEKSKERLLPKKEYHDFGLNDDNAEAKRSCLDALSDRVVRFRNGSKDFASKLYEMGRSDRRKVVFAMKAGLSLAIVSLFIYIKEEQLSKYSIWAILTVVVVFEFSIGATLNKGFNRALGTVSAGVLALGIAQLTVLVGRAFEELIIVFSIFIAGFLASYVKLYPAMKQYEYGFRVFLLTFCIVLVSGRHGLQFLSTAFYRLVLIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSTQEETLVDFALWEPPHGPYKMFNYPWRSYAKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFYEELQRVGIEGAKVLRQLGSKVERMEKLSKSDILLDVHEAAEQLQMKIDRLSFLLVNSESWEAVRHHGENEHPDNLIDVKDNENKQPEITSLNEVGDDPKLDIRIEPSVPEPSLSQTATKSFLSRAHLSFFADGIVNEPESRVYESASSLSLATFASNLIEFVARLQNLADEFQDLSEKANFKDPLEQPLLK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0299 560 Pfam Aluminium activated malate transporter 75 545 IPR020966 GO:0015743
Ssu7g0299 560 MobiDBLite consensus disorder prediction 436 462 - -
Ssu7g0299 560 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 15 557 - -
Ssu7g0299 560 Coils Coil 527 547 - -
Ssu7g0299 560 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 15 557 - -
Ssu7g0299 560 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0299 Ssu-Chr7 4916851 4920258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0299 23 556 Miscellaneous Gene Families AT1G25480 60.989 0.0 638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0299 7 4916851 4920258 Ssu7g0299 7 4916851 4920258 ECH