Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0297 atgacaagaaaaataatggcGGCTCTTGCCTCTAGTCTAAACCCTAGCCCACAATACACTGTTCCGACAGACTATCCACCCCATGGTTCTGTGGTTGAGGAAATAGAAGGGCTTATTAGAGTACACAAAGATGGATACGTGGAACGACCACAAGTTGTTCCATGTGTCACTATTAGTACTTTGAGTCCAGAGCTGAATGTGACATCGAGAGACATGGTCATTGACAGTGTCACAAACACATGGGCACGTGTTTATGTTCCAATTTGCCAACACAAGCTACCGTTGCTCGTTTATTTTCATGGGGGAGGCTTTTGTGTTGGGTCTGCAGCTTGGAGTTGCTACCATGCTTTCCTTGCAAGGCTATCTTCCAAAGTGGGGTGTGTGATTATGTCAGTGAACTATAGATTGGCCCCAGAGAACCCTCTCCCAGCTCCCTATGATGAAGGATTAAAGGCCTTAATGTGGGTGAAACAACAAATGCTACATCAGCAACACAATAAGGCTAGTGAATTATGGTGGACCACAAAGTGCAACTTCTCTAGTGTTTTCTTAGCTGGGGACAGTGCGGGTGCTAACATAGCCTACAACGTTGCCACAAGGCTAGGTGCATGTGATGGTGCTGCTTTAAGTCCTTTGAATTTGAAGGGCCTTATTTTGATACAACCCTTTTTCGGTGGAGAAGCGAGAACGGGTTCAGAGAAATGCATGGCTCAATCACCGGGTTCTGCTTTGAACTTGGCAGCATCTGACACTTATTGGCGCTTGGCATTACCGTGTGGTGCGAACCGTGACCATCCGTGGTGCAACCCTTTGGCGGTGAAATTGGAGGAGTTGAAGCTCTTGCGTACCTTGGTGTGCGTCTCGGAGATGGACATATTGAAGGATAGGAACTTGGAGTTCTGTGAGGCTTTGGCGAGGGCGGGGAAAAGGGTGGAGTATGGAGTGTTCAAAGGGGTTGGGCATGCATTTCAGATTCTAAGCAAGTCTCAGCTCGCGAAGAACAGAGCCGAGGAAATGATGGCTCGTGTTAAGTCCTTCATGGGTCTTTGA 1050 0.4695 MTRKIMAALASSLNPSPQYTVPTDYPPHGSVVEEIEGLIRVHKDGYVERPQVVPCVTISTLSPELNVTSRDMVIDSVTNTWARVYVPICQHKLPLLVYFHGGGFCVGSAAWSCYHAFLARLSSKVGCVIMSVNYRLAPENPLPAPYDEGLKALMWVKQQMLHQQHNKASELWWTTKCNFSSVFLAGDSAGANIAYNVATRLGACDGAALSPLNLKGLILIQPFFGGEARTGSEKCMAQSPGSALNLAASDTYWRLALPCGANRDHPWCNPLAVKLEELKLLRTLVCVSEMDILKDRNLEFCEALARAGKRVEYGVFKGVGHAFQILSKSQLAKNRAEEMMARVKSFMGL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0297 349 Gene3D alpha/beta hydrolase 40 348 IPR029058 -
Ssu7g0297 349 PANTHER ARYLACETAMIDE DEACETYLASE 18 347 - -
Ssu7g0297 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 182 194 IPR033140 -
Ssu7g0297 349 Pfam alpha/beta hydrolase fold 96 324 IPR013094 GO:0016787
Ssu7g0297 349 PANTHER CARBOXYLESTERASE 6-RELATED 18 347 - -
Ssu7g0297 349 SUPERFAMILY alpha/beta-Hydrolases 28 347 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0297 Ssu-Chr7 4900968 4902017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0297 20 347 Carbohydrate Esterase AT1G68620 52.096 2.26e-119 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0297 7 4900968 4902017 Ssu7g0297 7 4900968 4902017 ECH