Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3248 ATGATGATATTTGATGACATGGGGTTTTGTGGCGATTTGGATATGTTATGTGGTCCCCTTGGAGAGGGGGATGATGTTGCTTTGAGACAAACTGAACCAGATCCTGTAGTTGAGGATGATTATAGTGATGAAGAAATTGATGTGGATGAACTGGAGAGGAGGATGTGGAGGGACAAAGTGCGTCTCAAGCGACTGAAAGAACAAACCAAGGCTAAGGAAGGGGTTGATGCAGCAAAGCAAAGGCAGTCCCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATACTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAAGGGTTTGTTTATGGGATAATTCCCGAGAAAGGAAAACCAGTGACTGGAGCATCCGACAATCTTCGCGAGTGGTGGAAGGACAAGGTCAGGTTTGATCGGAATGGTCCTGCTGCCATAGCCAAGTATCAAGCTGATAATGCAATCCCAGGAAAGAATGATGGATGCAATTCCATTGGTCCGACTCCGCACACCTTGCAGGAGTTACAGGATACAACCTTGGGTTCGCTCTTGTCGGCACTGATGCAGCACTGTGATCCTCCTCAGAGACGTTTCCCATTAGAGAAGGGTGTTCCTCCTCCGTGGTGGCCCACCGGGAACGAAGAATGGTGGCCTCAAATTGGTCTACCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGATCTAAAGAAGGCATGGAAGGTTGGTGTTCTGACTGCGGTTATCAAGCATATGTCTCCTGATATTGCCAAGATCCGCAAGCTTGTGAGGCAATCCAAATGCCTTCAAGATAAAATGACAGCAAAGGAAAGTGCAACCTGGCTTGCCATCATCAATCAAGAGGAAGCCTTGGCTCGAGAGCTTTACCCTGACTATTGTCCCCCATTTTCCTCTGCCGGAGGTAATGGGTCCTTAGTCATCAACGATTGCAGCGAGTATGACGTTGACGGGGCCGAGGATGAGCTGAACTTTGATGTGGAGGACCGGAAACCTGAGCATCTTCATCCATCGAACCTTGGGATGGAGAGAGCAAGGGGAAGGATGCCAATTCAGCACCCTTCACATCCATTCAAGGGAGATGTTGTCACAAACCTGGATTTCATTCGGAAGAGGAAGATTTCTAGTGACTTAAACATGATGATGGCTCAGAAAATCTACACATGTGAGCATCCCCAATGCCCTTACAGTGAAGCTCGCGTTGGTTTCCAAGACAGGTCTTCAAGGGACAATCATCAATTGAGTTGTGCATATAGAAACAGTTCTGCAGATTATGGTGGTGGTCCCAATTTCCATGCTACTGAGGTTAAGCCAGTCATATTCCCCCAGTCCTTTGTGCAACCCAATACTACAAGTCAGTCTGCAAGTTTGGTGGCACCTTCATTTGATCTTACTGGGCTTGGAGTTCCGGAGGATGGCCAAAAAATGATTAGTGACCTTATGACAATCTATGatacaaattttataggaaACAAGAACCTAAGTTCCACCAACTGTGTAGCTGTAGAAAATCATAACCTATCTCAGCCCAGCATTCAACAACAGGACAGTTTTTTCTCTGGTCAAGGGATGGTGATGGAAGGAAACTTCTTTACTCGAGAGGAAGGTCAATTTGATCGGTTTAAGGCCATGAACACTCCTGAtaccaaccacaacaacaataataatatccaTTTGATGTTTAGCTCCTCTTGCGATTTGGCATCCTTTAATCTTAAGGAGGACATACAAGGAGTAGGGATGGATACCCTTCACAAACAACAAGAAGTTTCAATGTGGTACCAGTGA 1827 0.4505 MMIFDDMGFCGDLDMLCGPLGEGDDVALRQTEPDPVVEDDYSDEEIDVDELERRMWRDKVRLKRLKEQTKAKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPFSSAGGNGSLVINDCSEYDVDGAEDELNFDVEDRKPEHLHPSNLGMERARGRMPIQHPSHPFKGDVVTNLDFIRKRKISSDLNMMMAQKIYTCEHPQCPYSEARVGFQDRSSRDNHQLSCAYRNSSADYGGGPNFHATEVKPVIFPQSFVQPNTTSQSASLVAPSFDLTGLGVPEDGQKMISDLMTIYDTNFIGNKNLSSTNCVAVENHNLSQPSIQQQDSFFSGQGMVMEGNFFTREEGQFDRFKAMNTPDTNHNNNNNIHLMFSSSCDLASFNLKEDIQGVGMDTLHKQQEVSMWYQ 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3248 608 MobiDBLite consensus disorder prediction 70 92 - -
Ssu6g3248 608 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Ssu6g3248 608 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Ssu6g3248 608 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Ssu6g3248 608 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 607 - -
Ssu6g3248 608 Coils Coil 48 68 - -
Ssu6g3248 608 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 607 IPR006957 GO:0005634
Ssu6g3248 608 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3248 Ssu-Chr6 74057196 74059022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3248 2 607 EIL Transcription Factor Family AT3G20770 60.031 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Ssu6g3248 EIN3 5.7e-131 No_clan