Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2738 ATGCCCAACACGCGGCACTCACAGTTCCATTTCCTCAGAAGAGAAATCAACTATGACCAGCTTAAGAAGCGGCTGTGGAAGGATCGGATCCTGCTGCAGAAGCTAAAGGAAAAACTCCACAAAGAAGAGCCAGACCAACAAGCCAGACAAGAAGCATCTAGGCGAAAGAAGATGTCAAGAGCACAACATTCAATCCTCAAATACATGGTGAAGATTATGGAAGTTTGCAATGCTCAAGGATTTGTGTATGGGATCGTCCCTGAGAAGGGTAAGCCAGTGACTGGTTCTTCTGACAGCTTGCGTAAGTGGTGGAAAGAAAAAGTCAAGTTCGATAAAAATGCTCCTTCAGCCATTGCAAAATACATGTCACTCCTTGAAACAAACGAGTTGGATCCAGCTTCCTATATACATCTCCTTAATGACTTAAGATTCCCTCTTGAGAGAGGCTTGGCTCCACCTTGGTGGCCCACAGGGACAGAAAATTGGTGGGGGGAGCAAGGCCTTCTGGCCCAAGAACATGGCCCACCTCCTTATAAGAAGCCCCATGACCTCAAAAAGGCTTGGAAAGTGTCTCTCTTGGCTGCAGTCATCAAACACATGTCTCCTGATTTGGATAAACTCAGAAGGTTGGGGACTCGGTCCAAGACTTTGCAACATAAGATGACAGCTAAGGACACAGCAACTTGGTCCAAGGTCATGAACCAAGAAGAAGCTCTGCTGCAACTGGCCAACAAGTGCCTCAAAATATCTCCATCAAAGGAAGATGAAAACGAGTGTGAAAGCTCTACTAGTACTACCCGTGAAGGGAGTTGTCTAGCTGAGTAG 825 0.4642 MPNTRHSQFHFLRREINYDQLKKRLWKDRILLQKLKEKLHKEEPDQQARQEASRRKKMSRAQHSILKYMVKIMEVCNAQGFVYGIVPEKGKPVTGSSDSLRKWWKEKVKFDKNAPSAIAKYMSLLETNELDPASYIHLLNDLRFPLERGLAPPWWPTGTENWWGEQGLLAQEHGPPPYKKPHDLKKAWKVSLLAAVIKHMSPDLDKLRRLGTRSKTLQHKMTAKDTATWSKVMNQEEALLQLANKCLKISPSKEDENECESSTSTTREGSCLAE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2738 274 Pfam Ethylene insensitive 3 20 142 IPR006957 GO:0005634
Ssu5g2738 274 Pfam Ethylene insensitive 3 143 237 IPR006957 GO:0005634
Ssu5g2738 274 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 143 264 IPR006957 GO:0005634
Ssu5g2738 274 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 142 IPR006957 GO:0005634
Ssu5g2738 274 SUPERFAMILY DNA-binding domain of EIN3-like 141 240 IPR023278 GO:0003700|GO:0005634
Ssu5g2738 274 MobiDBLite consensus disorder prediction 40 58 - -
Ssu5g2738 274 Gene3D - 137 246 IPR023278 GO:0003700|GO:0005634
Ssu5g2738 274 Gene3D - 47 128 IPR023278 GO:0003700|GO:0005634
Ssu5g2738 274 PANTHER ETHYLENE INSENSITIVE PROTEIN 143 264 - -
Ssu5g2738 274 MobiDBLite consensus disorder prediction 251 274 - -
Ssu5g2738 274 MobiDBLite consensus disorder prediction 40 59 - -
Ssu5g2738 274 PANTHER ETHYLENE INSENSITIVE PROTEIN 15 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2738 Ssu-Chr5 73028159 73029391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2738 15 240 EIL Transcription Factor Family AT5G65100 58.824 1.73e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Ssu5g2738 EIN3 1.6e-47 No_clan