Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2182 ATGGCAGCGGTGACGGAATCACTACTTCCCTTCAGAAACATGGAGCAGCAACAACCCCTTTCCCTTTCCCTTTCTGTTGTGGCTGCTGCTTCTGCTTCTGCTCCTTCCCCTTCAAAGGAGCGGTCAAATCCATCAGATGCAGTTATCTTCTTTGGTCTCAGTTTGGCTCTGGGGATTGCATGTAGGCACCTCTTGCGTGGGACCAGAGTCCCTTATACTGTTGCCTTACTCGTCCTTGGCATTGCCCTTGGATCCATAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGATGGAATTCGTCTTTGGTCAGAGATTGATCCAGATCTTCTGTTAGCTGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTTAATGGAAGTTCACCAAATTAAGAGGTGTATTGCACAAATGATCTTACTGGCTGGTCCTGGTGTTGCACTTTCGACCGTTTGTCTTGGAGTTGTTTTGAAGCTTACTTTTCCATACAACTGGAGTTGGAAAACGTCACTGTTGCTTGGGGGACTTCTGAGTGCAACTGATCCTGTTGCTGTTGTGGCTTTGTTGAAAGATCTTGGTGCCAGCAAAAAACTAAGCACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACTCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAATTGGGCTGCTATAATCAAATTTCTAGCACAAGTTTCACTTGGAGCGGTAGGAATGGGTCTTGCTTTTGGGATTGCATCTGTTTTGTGGCTtgggtttatttttaatgatacaGTGATTGAGATTGCTCTAACATTCGCTGTTAGCTACATTGCTTATTTCACTGCTCAGGAGGGTTCAGATGTCTCTGGTGTTTTGACAGTGATGTCTTTGGGAATGTTCTATTCTGCATTTGGTAGGACAGCTTTTAAGGGTGAAAGTGAACAAAGCTTACATCACTTTTGgGAAATGGTTGCTTATATTGCTAATaccttaattttcattttgagTGGAGTTGTTATAGCTGAAGGAATACTTAGTGACAACACTGTTTTCTATCATGGAACATCATGGACCCAGCTCTTGCTTCTCTATGCATATGTTCAAGTGTCTCGATGCATTGTAGTTGGAGCATTATTTCCTTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTTATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGGCACTTTCATTATCAGTTAAGCGTTCGGGTGGCAAATCAGTTGAATTGACTTCAGAGACCGGAACATTGTTTGTTTTCTTCACTGGTGGAATTGTGTTTTTaacacttacaataaatggttcAACCACACAATTCATTTTACACTACCTTGGCATGGATAAATTATCAGCAGCTAAGAGACGTATCCTTGACTTTACAAAGTACGAAATGTTGAACAAGGCATTGGAGGCTTTTGGTGAACTTGGAGATGATGAGGAACTTGGGCCTGTTGACTGGCCCACAGTGAAGAGATATATCTCCTGCTTAAACGTTATTGAAGGTGAACGTGTTCACCCTCATGGTGCACCTGAAAGTGATAGTAACCTAGATCCTATGAACTTGACAGACATACGAGTACGCCTTCTAAATGGTGTACAAGCTACTTACTGGGAGATGCTTGATGAAGGAAGAATTTCTCAAACAGCAGCTAATATCCTTATGCTATCCGTAGAGGAAGCAATAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGACAGGTTTGAAAGCTAACGTTCAGTTCCCGAATTACTACAAGTTTCTCCAGTCTAGTATGTTCCCACCGAGGTTAGTTACATACTTCACTGTGGAAAGGTTGGAATCAGCGTGTTATATTTGTGCTGCATTTCTTCGGGCTCACAGACTTGCTCGACAACAATTACATGACTTCATAGGTGACAGTGATGTTGCTTCTGCTGTCATCAATGAAAGTGTTGTAGAAGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATATAACATACCCACAGGTTTTGTGTGTTGTAAAAACAAGGCAAGCAACATATGCAGTGctaaatcatttaattgaatatGTTCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACAACTCCATGATTCTGTCCAGactgatttaaagaaattatttagaaatcCTTCTTTGTTTAAGCTTCCTAAAATGAGTAGTATGCATCCTATGTTGGGTGCTCTCCCATCTTCAGTTCGTGAATCACTTGCAAGCTGTACCAAGGAAATGATGAAATTGCGTGGTTTGACACTTTACAAAGAAGGTGCCAAGTCAAATGGTGTTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGATAAGAACCAAACACTCTTTTTATCCTACTTTTACCCATGGGAGCACATTGGGTCTTTATGAAGTGCTGACTGGAAGATCATATATCTCTGATGTCATCACAGATTCTGTAGTATTCTGCATTTTTCTTGAAGCTGATAAGATAATATCATGTCTCAAATCAGATCCTTCAACGGAAAAATTCCTGTGGGAGGAAAGTGCTATTTTCCTTTCCAAACTATTGCTTCCTCAGATATTTGAGAGACTGGGTATGCAAGATTTAAGAACTCTTATTGCAGATCCAGAGAGATCTCGAATGACCATATTCATAAGAGGGGAAACAATAGAAATCCCTCATCATTCTGTTGCCCTCTTACTAGAAGGATATGTCAAAACTCAAGGTTGTCAAGAACTGGTAACAGCGCCAGCAGCCCTGCTTCCTTCACACTGGAATCTAAGCTTCCAAAATTTGGCAAGTTCAGGTTCTAAGGAGGCTAGTTTTACTCATCAAGGATCTTGTTATCTAGTTGAAACAACAGCAAGGGTAATTGTGTTTGACATTCCAGCATCCGAGGCTGATTCTGCTCTTGTTAGAAAGTCAAGTTCACTGTTATCACATGCCAGGGATCATCCTCATAGATCTTTCCGTCGAAAACATAGTGGTCTTATGAGTTGGCCCGAACATTTCTATAAACACACGAACCATAAGCAGAGATCTGAAGGGGTTGGGCGACAAACCAATAGTTTGTCTGCAAGGGCAATGCAGCTGAGCATTTATGGGAGCCTGGTGGACATCCCTCACCGGCATAGAAGTTTGTTAAGCAATCATGCTAGACCACCGCATAGCTTGTCCTATCCAACCATTGGGTCACATCAAGGCCGTCCGCTTGTTTCATTCAAATCAGAAGGAGCTGCGACTGCCAAGAAGGTCCATGAGGTCACAAGAAATGTTACAAATCCTCCTCCTTCACAAAGCACAATACGAAGAGAACATCATCATGGAGATAATTCAAGTGATGATTCTGCTGTTGAAGAAGAAGATATTATTGTGAGGATTGATTCACCAAGCACGCTATCTTTTTGTTAG 3471 0.4085 MAAVTESLLPFRNMEQQQPLSLSLSVVAAASASAPSPSKERSNPSDAVIFFGLSLALGIACRHLLRGTRVPYTVALLVLGIALGSIEYGTHHRLGKIGDGIRLWSEIDPDLLLAVFLPALLFESSFLMEVHQIKRCIAQMILLAGPGVALSTVCLGVVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWAAIIKFLAQVSLGAVGMGLAFGIASVLWLGFIFNDTVIEIALTFAVSYIAYFTAQEGSDVSGVLTVMSLGMFYSAFGRTAFKGESEQSLHHFWEMVAYIANTLIFILSGVVIAEGILSDNTVFYHGTSWTQLLLLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVALALSLSVKRSGGKSVELTSETGTLFVFFTGGIVFLTLTINGSTTQFILHYLGMDKLSAAKRRILDFTKYEMLNKALEAFGELGDDEELGPVDWPTVKRYISCLNVIEGERVHPHGAPESDSNLDPMNLTDIRVRLLNGVQATYWEMLDEGRISQTAANILMLSVEEAIDLASSEPLCDWTGLKANVQFPNYYKFLQSSMFPPRLVTYFTVERLESACYICAAFLRAHRLARQQLHDFIGDSDVASAVINESVVEGEEARKFLEDVNITYPQVLCVVKTRQATYAVLNHLIEYVQNLEKAGILEEKEMLQLHDSVQTDLKKLFRNPSLFKLPKMSSMHPMLGALPSSVRESLASCTKEMMKLRGLTLYKEGAKSNGVWLISNGVVKWESKMIRTKHSFYPTFTHGSTLGLYEVLTGRSYISDVITDSVVFCIFLEADKIISCLKSDPSTEKFLWEESAIFLSKLLLPQIFERLGMQDLRTLIADPERSRMTIFIRGETIEIPHHSVALLLEGYVKTQGCQELVTAPAALLPSHWNLSFQNLASSGSKEASFTHQGSCYLVETTARVIVFDIPASEADSALVRKSSSLLSHARDHPHRSFRRKHSGLMSWPEHFYKHTNHKQRSEGVGRQTNSLSARAMQLSIYGSLVDIPHRHRSLLSNHARPPHSLSYPTIGSHQGRPLVSFKSEGAATAKKVHEVTRNVTNPPPSQSTIRREHHHGDNSSDDSAVEEEDIIVRIDSPSTLSFC 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2182 1156 Gene3D - 168 220 - -
Ssu5g2182 1156 SUPERFAMILY cAMP-binding domain-like 747 869 IPR018490 -
Ssu5g2182 1156 ProSiteProfiles cAMP/cGMP binding motif profile. 751 846 IPR000595 -
Ssu5g2182 1156 Pfam Sodium/hydrogen exchanger family 49 460 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu5g2182 1156 MobiDBLite consensus disorder prediction 1121 1142 - -
Ssu5g2182 1156 PANTHER SODIUM/HYDROGEN EXCHANGER 41 987 IPR018422 GO:0006812|GO:0015299|GO:0016021
Ssu5g2182 1156 PANTHER - 41 987 - -
Ssu5g2182 1156 MobiDBLite consensus disorder prediction 1097 1142 - -
Ssu5g2182 1156 Gene3D Jelly Rolls 715 877 IPR014710 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2182 44 1155 Antiporters AT2G01980 63.313 0.0 1365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2182 5 62705026 62739072 Ssu5g2182 5 62705026 62739072 ECH