Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2181 ATGGAAAGCCGTGTCCACATCCCTTCTTCGTCAAACGAGGTCGTCGTCCACGTCAACGGCGACTCCGGTCGCCGCTCTCACCCAACCGACGATGCATTCTcctctcaacaacaacaacagCAGGAGAAGGATACGGGGGACACTTTGGTTCTAGCGTACAAGACTCTTGGTGTGGTGTTTGGAGGACTCGTGACATCACCTCTCTACGTGTACCCTTCAATGCCACTCAAGTCTCCGACGGAAGATGACTATCTGGGAATCTACAGTATCATGTTTTGGACTCTTACTCTCATAGGGGTTGTCAAGTATGCCAACGTTGCCATCAGAGCTGATGACCATGGTGAAGGTGGGACTTTTGCCTTATACTCATTGCTTTGCAGGCATGTGAATATTGGGATCCTGCCTTCCAAGCATGTCGGGTTGAACACAACTACAGACGTTCAAAAGAGTACTTTGCTTGCCAGGTTCTTCCAAACAAGCGTGGTTGCTCGGAGGCTCTTGCTCTTTGTTGCTATGTTGGGAACTTGCATGCTTATTGGTGATGGTATACTTACGCCCGCAATTTCAGtgttGTCAGCAATGGATGGTCTAAGAGCGCCTTTTCCTTCAGTAAGCAAATCGCTAGTGGAAGCACTCTCTGCAGTTGTCTTGATCGTTCTGTTCTTGTTGCAAAAATTTGGAACATCCCGTGTTAGTTTCCTCTTTTCCCCAATAATGGGTGCATGGACTCTGAGTACCCCACTTGTAGGAATTTACAGCATCATACACCACTATCCTAGCATATTTAAGGCTTTATCTCCGCACTATATATTCCGTTTCTTTTGGAGAAATGGAAAATCTGGCTGGCTTTTACTTGGTGGTACTGTCCTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTCAATCAGAAGTCCATTCAGATAGCTTTTCTATTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAGACAGCATACCTGATCAAGCATCCTAATGATCATGATGATGGCTTTTACAAATTTATACCAACTTCAGTCTACTGGCCTATCTTTGTCATTGCCACTTCAGCTGCAGTTGTTGCTAGCCAGTCGTTAATATCAGCCACCTTTTCTGTAATCAAGCAATCTGTAGTGCTGGATTATTTTCCTCGGGTAAAGGTTGTCCACACATCTCATAATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTGATGGCCCTTTGCGTTGCTGTGATACTTATTTTTGGAGATGGGAAAGATATTGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTAATGCTGATCACCACTATATTACTTACATTAGTCATGATCATGATATGGAGGACTCCTGCTGTGCTGGTTGCCCTATACTTCGTTGTATTTTTTGTGATGGAAGGGGTTTATGTCAGTGCAGTTTTCACTAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCATTTATCCTTGCTTTCATCATGTTTGGTTGGTTTTATGGTAGACAAAGAAAGATTGATTATGAGGTAACCCACAAGATAACCTTTGAGAGACTTGAAGAGCTTTTAGCTGACCGCAGTGTCCAAAGGGTTCCTGGGCTATGCTTCTTTTATACCAACATTCAAGACGGGCTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCACAAGGTCACAATATTTACTACTCTTAGATATTTGTTAGTCCCTAAGGTTGCTCCACATGAGAGGATTGTcatcaagaaatcaaatctCCAAGGGGTATATTGCTGTGTGATTCAGTATGGCTATGCAGATGCTCTAAATTTGGAAGGAGATCATTTTGTTGATCAAGTCGTTGATAGTTTGACACTGCATATACAGAACTGTCCTGACAATCTTTCATCTGATTCTCAAGAGATTGTTGAAGAGACTTCGAACGCAGAAGAAGCAAGGCGTGCTGGGGTAGTTCATGTTCGTGGAAAGACAAGATTTTGCATTGGCCTGAACTGTGGCTGGTTTGATAAAATTGTGCTTCGTTTTTATGAAGTCATGCACAGTAACTGTAGATCTGGCCTGCCTGCTCTAGGGGTTCCACCACAGCAACGGATTGAAGTTGGAATGCTATACGAGGCTTGA 2157 0.427 MESRVHIPSSSNEVVVHVNGDSGRRSHPTDDAFSSQQQQQQEKDTGDTLVLAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYANVAIRADDHGEGGTFALYSLLCRHVNIGILPSKHVGLNTTTDVQKSTLLARFFQTSVVARRLLLFVAMLGTCMLIGDGILTPAISVLSAMDGLRAPFPSVSKSLVEALSAVVLIVLFLLQKFGTSRVSFLFSPIMGAWTLSTPLVGIYSIIHHYPSIFKALSPHYIFRFFWRNGKSGWLLLGGTVLCITGSEAMFADLGHFNQKSIQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPTSVYWPIFVIATSAAVVASQSLISATFSVIKQSVVLDYFPRVKVVHTSHNKEGEVYSPEVNYILMALCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAVLVALYFVVFFVMEGVYVSAVFTKFAEGGWIPFAISFILAFIMFGWFYGRQRKIDYEVTHKITFERLEELLADRSVQRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTIFTTLRYLLVPKVAPHERIVIKKSNLQGVYCCVIQYGYADALNLEGDHFVDQVVDSLTLHIQNCPDNLSSDSQEIVEETSNAEEARRAGVVHVRGKTRFCIGLNCGWFDKIVLRFYEVMHSNCRSGLPALGVPPQQRIEVGMLYEA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2181 718 Pfam K+ potassium transporter 53 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g2181 718 PANTHER POTASSIUM TRANSPORTER 17-RELATED 36 717 - -
Ssu5g2181 718 MobiDBLite consensus disorder prediction 18 44 - -
Ssu5g2181 718 MobiDBLite consensus disorder prediction 29 44 - -
Ssu5g2181 718 TIGRFAM kup: potassium uptake protein 51 717 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g2181 718 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 36 717 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2181 Ssu-Chr5 62687191 62692019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2181 48 717 Inorganic Solute Cotransporters AT4G13420 38.798 1.48e-176 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2181 5 62687191 62692019 Ssu5g2181 5 62687191 62692019 ECH