Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2145 ATGGACAATTCAGCATTTCGAAGTTTTCTTCAGGTTCTTCCCCCTGTTGAATTTGCCTGCGTCTATGGATCATCTCTTCATCCATCCAACCACGACAAGACAACCATGACAGATTATATTCTGGGTGTGTCTGACCCAAAGCAGTGGCATTCTGAGAATCTGAAATTTAACAAACATCACTACGCATCATGGATGGTACACCTTGGTGGGGAGAGGCTGATTACTGGAGTTGCTGATAAAATTGGTGTGGGAGTGCATTTCAACCCTTTTGTTACTTGGAATGGAAAGCTGTTCAAGTATGGGGTTGTTCGAATGCATGACTTACTTCAAGATGTACAGTATTGGGAGAAATTCTACCTGTGTGGCCGGTTACAGAAACCAGTTCATATTGTTGTTGATAATTTAGATGTTAGCAGCACCAATTCTGTTAACTTGAGAGCTGCAGTGTCAGCTGCTCTTCTCCTACTTCCGTCAGAATTCACAGAGGCAGATCTGTATGCCAAAGTATGTAGTCTCTCATACACAGGTGATGTACGCATGTTATTTGCTGAGGATAAAAACAAGGTGAAGAAGATTGTTACTGGGCAGTTTGATCTATTTCACTCCATGTATAAGCCATTTCTTGAAGAATACGAGGCTAAGGAGTTATTGAGACTTTCATCAACTGCCAATGACCAAATACATGTCTCTCAGGATTGTGACTTATCAGTTGCTTGCTCTCTAGTGTCTGCTCTTCCTCCATCAATCAGAAGCCAGATGAGTATGATGCAGggagagaaaacaaaattaagggaAACTGGCAGAGTCATACATGATACTAAAATCAGCGCAAGAGAAGAGGCTGCAAATTGCTTGCAGAGAATTCTGAGGCGAAGAGTAATGGTTTCAAGTGCAAGGCAGGCCATATCTGGCCTTCTGGCCGTTGGTGGGGTAAATGCTAGCAGGTATCTTGCTAAGAAAGTTAGCAAAGCCTGGAAATCATGGGCATGA 990 0.4192 MDNSAFRSFLQVLPPVEFACVYGSSLHPSNHDKTTMTDYILGVSDPKQWHSENLKFNKHHYASWMVHLGGERLITGVADKIGVGVHFNPFVTWNGKLFKYGVVRMHDLLQDVQYWEKFYLCGRLQKPVHIVVDNLDVSSTNSVNLRAAVSAALLLLPSEFTEADLYAKVCSLSYTGDVRMLFAEDKNKVKKIVTGQFDLFHSMYKPFLEEYEAKELLRLSSTANDQIHVSQDCDLSVACSLVSALPPSIRSQMSMMQGEKTKLRETGRVIHDTKISAREEAANCLQRILRRRVMVSSARQAISGLLAVGGVNASRYLAKKVSKAWKSWA 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2145 329 PANTHER BNAC03G57080D PROTEIN 6 327 - -
Ssu5g2145 329 PANTHER UNCHARACTERIZED 6 327 IPR015222 GO:0004605|GO:0032049
Ssu5g2145 329 PIRSF MMP37 2 328 IPR015222 GO:0004605|GO:0032049
Ssu5g2145 329 Pfam Phosphatidate cytidylyltransferase, mitochondrial 8 323 IPR015222 GO:0004605|GO:0032049
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g2145 Ssu-Chr5 61728535 61732848 Tandem
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2145 5 61728535 61732848 Ssu5g2145 5 61728535 61732848 ECH