Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2140 atggaaggTTTTCACCCTTCTATGACCTCTCCTTTTTCTTACACATTCCCCATCAGTGGTGCTGGTAGTAGCACTACTAGCCATATTACCACTGGCACTTACAGCACTTCAACTCCATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAAAGGCTTCTTGACCGTGTCATAGCCTTCCTTCCCGCACCTGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCTCTTCTCTTCTCCAACACCTTCCTTGAATTATACCTGCAAGTCTCCCCACGCCGCCACTGGTTCATGTTCTTCAAGCACCACAAGACCCGCAAGAGCTACATCtacaagaacaacaacaatggtAGCGGTTGTGGACACGGTGCGGCCTCATCCTGTGAAGAAGGGTACCTCTTTGATCCCTATGACATGGCATGGCACCGCATTTCCTTTGCTTTGGTCCCTTCTGGATTCTCTGCGGCCTCTTCTTCTGCTGGTTTACTCTGCTGGGTTTCTGATGAGGCTGGCCCTAAGACTATGCTTCTGTGCAACCCTTTACTTGGTTCTCTCACTCAGCTACCTCCCACGTTGAGACCTAGACTCTTCCCTTCTATTGGCTTGACCATTAGCCCCACCTGCATAGATGTCACCGTTGCTGGGGATGACATGATTTCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGTGGGTTTTACTCCTTGTGGGGCACCACCTCTCCTCTGCCTAGGCTCTGCAGCCTTGAATCTGGTCGAATGGTTTATGCTGAAGGGAAGTTTTACTGCATGAATTGCAGCCCTTTCAGTGTGTTGGCTTATGACCTCACTTCAAACGCTTGGTTCAAAATACAAGCCCCCATGAGGAGGTTCCTTAGGTCTCCGAACCTTGTTGAGTGCAAGGGGAAGCTGCTCCTTGTTGCGGCTGTTGAGAAGAGCAAGCTGAACGTGCCCAAGAGTTTGAGGGTTTGGAGTTTGCAGGCCTGTGGGACAATGTGGGTGGAGTCAGAGAGAATGCCGCAGCAGCTTTACATTCAGTTTGCTGAATTGGAAGTTGGGAACGGGTTTGAATGTGTAGGGCATGGGGAGTTTATTGTCATCATGATTCGCGGAACGGACAAGGCGTTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCGTGCCCTTACATTGCACACGGCTTTGAGTTGCATGGTTTTGCCTATGAACCTAGACTTGCCACCCCAGTCACTGGCCTCCTTGATCAATTGGCACTGCCCTTCCAGACTTTTAATGCTTAA 1314 0.4871 MEGFHPSMTSPFSYTFPISGAGSSTTSHITTGTYSTSTPWMNSRIWSKLPQRLLDRVIAFLPAPAFFRARCVCKRWYALLFSNTFLELYLQVSPRRHWFMFFKHHKTRKSYIYKNNNNGSGCGHGAASSCEEGYLFDPYDMAWHRISFALVPSGFSAASSSAGLLCWVSDEAGPKTMLLCNPLLGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSPLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDLTSNAWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHGFELHGFAYEPRLATPVTGLLDQLALPFQTFNA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2140 437 Pfam F-box domain 46 80 IPR001810 GO:0005515
Ssu5g2140 437 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 46 418 - -
Ssu5g2140 437 Gene3D - 41 86 - -
Ssu5g2140 437 SMART fbox_2 49 89 IPR001810 GO:0005515
Ssu5g2140 437 SUPERFAMILY Galactose oxidase, central domain 70 403 IPR011043 -
Ssu5g2140 437 SUPERFAMILY F-box domain 39 118 IPR036047 GO:0005515
Ssu5g2140 437 PANTHER F-BOX/KELCH-REPEAT PROTEIN 46 418 - -
Ssu5g2140 437 ProSiteProfiles F-box domain profile. 43 92 IPR001810 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2140 5 61682583 61683896 Ssu5g2140 5 61682583 61683896 ECH