Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2135 ATGAGAATGAGATTCTCGGCGGTGTGTTTTGTCTTATTATTGGTGGTGTTAGAAGTAGAAGAGACCACATGTTTCACTTTTAACAGAGAGAAAAAGCTGTCAGAATTCAAGAACAAACTTGACCAAAAGCTAGCTACTCCCTTAACTTCATCACCCTCGGCATCACCACCTGCTTCCTCAGAAACCAAGATGAGTGGCAGGGTGTTGTGCGTGAGTGAATATGGTGCGGACCCATCGGGGTCTGAAGAGAGCAGTGATGCCATTTTGAAAGTTGTGGAAGATGCTTTTGCCTTGCAAAAGGGTCTTGAATTGGTGGGAGGGGTGAATGACCTTGGTGGCGTTGTGATTGATTTGCAAGGTGGGAACTACAAAATCAGCAAACCCATTACATTCCCTTCATCTGGAGGTGGCAATGTTGTGGTAAAAGGAGGAACGTTGAGAGCATCTGATACATTTCCTGGTGACAGACATCTAGTTGAGTTATGGTCATCAAAATCTGGGAAATTTGAGACAAAAGAATCTCTGCATGCTGATGGCTTCAACAGCATCAAAGCACAAAACAATGCAATTTACTATGAAGACATAACTTTCCGGGACATCCTCTTTGATTCATCCTATAGAGGAGGAGGGATTTTCATTGTTGATTCTGCTAGAACCCGGATCAACAATTGCTTCTTCCTTCATTTCACCACAGAAGGAATTCTAGTCCAACAAGGACATGAGACCTTCATATCAAGTTGTTTTCTTGGGCAACACTCAACCGTTGGCGGAGACAAAGCGAGAAGGACTTCTCAGGGGTGGCCATTGATCTTGCTAGTAATGATAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCCATTGGTGTTGTGCTGA 876 0.4372 MRMRFSAVCFVLLLVVLEVEETTCFTFNREKKLSEFKNKLDQKLATPLTSSPSASPPASSETKMSGRVLCVSEYGADPSGSEESSDAILKVVEDAFALQKGLELVGGVNDLGGVVIDLQGGNYKISKPITFPSSGGGNVVVKGGTLRASDTFPGDRHLVELWSSKSGKFETKESLHADGFNSIKAQNNAIYYEDITFRDILFDSSYRGGGIFIVDSARTRINNCFFLHFTTEGILVQQGHETFISSCFLGQHSTVGGDKARRTSQGWPLILLVMIMQSQMLQFSQQPLVLC 291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2135 291 Gene3D - 70 263 IPR012334 -
Ssu5g2135 291 PANTHER POLYGALACTURONASE QRT3 3 266 IPR039279 GO:0004650
Ssu5g2135 291 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 3 266 - -
Ssu5g2135 291 SUPERFAMILY Pectin lyase-like 67 247 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g2135 Ssu-Chr5 61633538 61638389 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2135 5 61633538 61638389 Ssu5g2135 5 61633538 61638389 ECH