Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2111 atgagggAACCATCGTCGGTGGGATTCGAAGGCAACGGCGTCGTTTCTCCGCCGCCGCAAGCTCTCCTCGAGAGACTCAAAGACTACGGTCAAGAAGACGCTTTCGCCCTCTGGTACGAGCTCTCCCCCGAGGAACGCGACCTTCTCGTCAAGGACATCGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGATGCTCGCTGCGATCTCAAGGGCTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGGTGGAGGAGAGAAGCCAGGAGGATCGAGAGAGATGGTGGAAAATGGGGTTGAAGGCTATTTCAGATGGCAAGTTAGCGGTGTTGCTTTTATCTGGTGGCCAGGGAACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAatataggACTTCCATCTGGGAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGTACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTGCTTCTTCAGTGCAAATACACTGGTACATAATGACTAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTCGAGGCAGAACAGGTTACATTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGTAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGACGGGAATGGTGGAGTGTATTCAGCCCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACtgGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGCAAGGCATATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACCATAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAACAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACGACTGCACTTTTTGAGGTATTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAACGGATCCAATGTTGACACTCCAGACAGTGCAAAACTGCTTGTTCTTCGACTCCATACTCGTTGGGTTGTTGCTGCAGGTGGCTTCTTAACACATTCAGTACCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCGTATGCTGGTGAAAACCTGGAACCTATATGTCGAGGAAGAACATTTCATGCACCTTGTGAGATCACATTCTAG 1473 0.4467 MREPSSVGFEGNGVVSPPPQALLERLKDYGQEDAFALWYELSPEERDLLVKDIESLDLSRIDRIIRCSLRSQGLPAAAIEPVPESSVSTVEERSQEDRERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAQATNENSASSVQIHWYIMTSPFTDEATRKFFESHKFFGLEAEQVTFFQQGTIPCVSKDGRFIMETPYRVAKAPDGNGGVYSALKSTKLLEDMASKGIKYIDCYGVDNALVRVADPTFLGYFIDKGVAAAAKVVRKAYPQEKVGVFVRRGKGGPLTIVEYSELDQSLASAVNQTTGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEFAPVKNANGSNVDTPDSAKLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEPICRGRTFHAPCEITF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2111 490 CDD UDPGlcNAc_PPase 99 420 - -
Ssu5g2111 490 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 488 IPR029044 -
Ssu5g2111 490 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 18 486 IPR029044 -
Ssu5g2111 490 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 15 489 IPR039741 -
Ssu5g2111 490 Pfam UTP--glucose-1-phosphate uridylyltransferase 64 447 IPR002618 GO:0070569
Ssu5g2111 490 PANTHER UDP-N-ACETYLGLUCOSAMINE DIPHOSPHORYLASE 1 15 489 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2111 5 61270790 61282362 Ssu5g2111 5 61270790 61282362 ECH