LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu5g2108	ATGGATTCAAGAGTAGATACTGATGAAGATGGTGATAACAGAGGTAGTATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAGAAATATGTACAGAGAAAAAAAATTTTCTGCATTGTTGCTTCTGCGGCTTGCATTTCAGAGTCTTGGTGTGGTTTATGGAGACTTGGGCACTTCACCGTTGTATGTTTTCTACAATACATTTCCAAATGGAGTGAAAGATCAGGAGGATGTAATCGGAGCCCTTTCTTTGATTATCTACTCTCTTACCTTGGTGCCACTcctcaaatatgtttttgttgtattaaGAGCAAATGACAATGGCCAAGGTGGAACATTTGCGCTTTATTCCTTGCTTTGCCGGCATGCAAAGATAAAAACCATTCCCAACCAGCATCGAACTGATGAAGAGCTAACAACATATAGTCGATCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGGAACAAGAATCTGCGAAGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTTATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCAGCTGTTGGTGGCATCAAGGTAAATCAGCCTAGGATGAGTAGTGGTGTAGTAGTGCTGGTTGCTGTGGTAATATTAGTTGGATTCTTCAGTATGCAACATTATGGCACAGATAGAGTTAGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGTATAGGTATATTTAACATCTGGAAGTATGGAAGCAGTGTTCTAAAAGCTTTTTCTCCGGTGTATATATATCGCTATTTtagaagaggaggaaaagaaGGCTGGACTTCCCTCGGTGGGATCATGCTCAGCATAACTGGGACTGAAGCTCTTTTTGCTGACCTAGCCCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGTCAAGCTGCTTATATTATGAATAACTTGAGCCATTCACAAGATTCTTTTTATCGTTCTATTCCAGATACAATATACTGGCCAGTATTTGTTGTTGCAACATTGGCAGCCATAGTTGCAAGCCAGGCCACAATAAGTGCAACTTTTTCGATTATTAAGCAAGCCCTTGCTCTTGGATGTTTCCCTAGAGTAAATGTTGTCTATACATCAAAGAAATTCCTCGGCCAGATATATGTTCCAGATATTAATTGGATCCTTATGATTCTTTGCATTGCTGTTACCGCTGGGTTCGAAAATCGAAACCAGATTGGAAATGCATATGGTACTGCGGTTGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTAATCATGATACTAGTGTGGCGCTGCCATTGGATTCTTGTCCTCATCTTCACTGGCTTATCATTGATTGTGGAATTGACATACTTCTCCTCGGTACTCTTCAAAGTTGATCAAGGTGGGTGGGTTCCACTTGCATTTGCTGGagcatttcttattattatgtcTGTTTGGCATTACGGCACAGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTCGGGCTTGGCCCAAGTTTAGGACTTGTTCGTGTGCCCGGAATTGGACTAGTTTACACAGAACTTGCTAGTGGAGTACCCCGCATCTTTTCTCATTTCATCACCAACCTACCAGCCATCCATtctgttgttgtttttgtatgTGTGAAGTACCTTCCTGTCTACACAGTCCCAGAAGAAGAGCGATTCCTTGTCAAGAGGATTGGACCTAAGAATTTCCACATCTTTCGGTGTGTGGCACGGTATGGCTATAAAGACCTTCACAAGAAAGATGatgattttgagaaaaaactcTTTGATaaccttttcttgtttgttcGGCTCGAGTCCATGATGGAAGGATGTTCAGATTCAGATGAATACAGTTTGTATGGACAGCAAATAGAGCATCCAAGAGATGGCCTTTTGAATAACAATGGACATACAGTTTCGTCCGATATGGATTTAACTATGTCCTCAGTAGATTCCATAGTACCAGTCAGATCCCCACTACACATGAATATTACTGTCAGGTCTTCTGGTCAAACAAGCAGCCAGACCGAAGTTGATGAACTTGAATTTTTGAATAACTGCAGGAATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTGAGGGCAAGGAGGGAATCAAGGTTCTACAAGAAAATAGCTgttgattatatatatgcatttctTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTGAATGTTGGTCAGATTTTCTATGTATAG	2376	0.3935	MDSRVDTDEDGDNRGSMWDLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPNGVKDQEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEQESAKSAILILVLVGTCMVIGDGILTPAISVLSAVGGIKVNQPRMSSGVVVLVAVVILVGFFSMQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKYGSSVLKAFSPVYIYRYFRRGGKEGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYIMNNLSHSQDSFYRSIPDTIYWPVFVVATLAAIVASQATISATFSIIKQALALGCFPRVNVVYTSKKFLGQIYVPDINWILMILCIAVTAGFENRNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLIFTGLSLIVELTYFSSVLFKVDQGGWVPLAFAGAFLIIMSVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPRIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDDFEKKLFDNLFLFVRLESMMEGCSDSDEYSLYGQQIEHPRDGLLNNNGHTVSSDMDLTMSSVDSIVPVRSPLHMNITVRSSGQTSSQTEVDELEFLNNCRNAGVVHILGNTVVRARRESRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu5g2108	791	TIGRFAM	kup: potassium uptake protein	52	790	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Ssu5g2108	791	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	2	790	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Ssu5g2108	791	MobiDBLite	consensus disorder prediction	1	20	-	-
	Ssu5g2108	791	PANTHER	POTASSIUM TRANSPORTER	2	790	-	-
	Ssu5g2108	791	Pfam	K+ potassium transporter	53	624	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu5g2108	Ssu-Chr5	61232256	61242127	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu5g2108	5	61232256	61242127	Ssu5g2108	5	61232256	61242127	ECH