Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1517 ATGCTGTCACGTATTCAAGGGACTTTAACAAAGAGCCTGTTTTTGTTTCTGGAGGTGACCAGGAGTGGAAGTCGTGTTCGGTGGGATGTAAATTTGGCTTTAGTGGGGATAAGAAACCTGATGCTGCATTTGGGTTACCTCAACCAAGTGGAGCAGCAAGCATTCTGCGATCGATGGAATCAGCACAATACTATGCTGAGAACAATATTGCCATGGCAAGACGGTGGGAGGGGATATAGCATTGTAATGACAACCAGTTTATCATCTGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCAATGAAGCCAAAAACTGAAAGTGCTCTTGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAATCAAACACCAAGATTGACTCTTATGGAGGTTGTCACAGGAACCGTGATGGAAGAGTGGACAAAGTGGAAGCCCTGAAGCACTACAAATTTAGCTTAGcatttgaaaattctaatgAAGAGGATTATGTAACCGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGATTTTGCTCCTTCTCCTGGTtcaattttacatattaaagaGCTAGAGGATGTCGAGTCCGTTGCAAAGTCCATGAGATACCTGGCTGAAAATCCTGAAGCATATAATCAATCCTTGAGgtGGAAGTTTGAGGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCCTGCCGCCTTTGCATTCACTTGGCGACAGTTAGTAGAGAGAAGGAAGAAAATAGTCCTGGCTTTAAGAAACGCCCTTGCAAGTGCACTAGAGGGTCAAAAACTGTATATCATGTTTATGTGAGAGAAAGGGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCCAGCAATTTAACTCTGGAGGCCTTGAAGTCTGCTGTTGTTTCGAAGTTCACATCCCTGAATCATGTACCTATATGGAAGACAGAAAGACCTGAAGTTCTAAGAAGGAGCAATGATTTAAAACTTTACAGAATATACCCAGTTGGCTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGGGATGCGGATTTCAGGAGTCACTTGGAAAGCAATCCTTGTGCGAAGTTTGAAGTCATTTTTGTGTAG 1215 0.4239 MLSRIQGTLTKSLFLFLEVTRSGSRVRWDVNLALVGIRNLMLHLGYLNQVEQQAFCDRWNQHNTMLRTILPWQDGGRGYSIVMTTSLSSDVPVGYFSWAEYDIMAPMKPKTESALAAAFISNCGARNFRLQALEALEKSNTKIDSYGGCHRNRDGRVDKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSPGSILHIKELEDVESVAKSMRYLAENPEAYNQSLRWKFEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENSPGFKKRPCKCTRGSKTVYHVYVRERGRFEMESIYLRSSNLTLEALKSAVVSKFTSLNHVPIWKTERPEVLRRSNDLKLYRIYPVGLTQRQALYTFSFKGDADFRSHLESNPCAKFEVIFV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1517 404 Gene3D - 80 253 IPR038577 -
Ssu5g1517 404 PANTHER BNAA06G03030D PROTEIN 76 382 - -
Ssu5g1517 404 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 76 382 IPR001503 GO:0006486|GO:0008417|GO:0016020
Ssu5g1517 404 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 113 279 IPR001503 GO:0006486|GO:0008417|GO:0016020
Ssu5g1517 404 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1517 77 404 Xyloglucan Fucosyltransferase1 AT3G19280 76.524 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1517 K00753 - gmx:100776065 632.484