Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1372 ATGCTATTGCTATTACCACCTCAGTTTGCTTCGCAAACGCGCTtgccttttccttttccctCCACCGTCAAACTCAAGGTTGTGTCCGAAGCTGATGCCTTCCCTTCATTTCTTCCCAAAGAAGTCCACAGAATCAAAGACCCTTTTGCGCGAAGCCTTGCTATGCGAATTCAGAGACTTCCCGTTTCTGTTAGGTTCTCTGAAAATCCTATCATGAGTAGTTTTGTGAAGCCATTGACGCAGAACAAGGCAAATCCAGTTGTCCTTCTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATATACATATCCATTGCTTGAGGAAGCTGGTTTTGAGACATGGGCAGTTGACATTCTTGGTTGGGGTTTCTCTGATCTAGAAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCACATATATCAGTTTTGGAAGTCCTACATCAAAAGGGAAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCAGTTGCCATTGACTTTGCGGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTATATGCAGAAGGAACAGGAAACGTAGCAACCTTACCTAGAGTGGCAGCCTATGCTGGGGTATATATATTGAAGAGCATTCCATTACGCTTATATGCTAACTATTTGAGCTTCACTAACATATCTTTCAGTACCAGCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTATTGCCATGGTGGGAGGATGCTACAGTTGATTTTATGACTAGTGGTGGTTACAATGTTGCCTCCCAGATAAAAAAGGTAAAGCAGAAAACTCTCATCATTTGGGGGGAGAATGACCGCATAATTAGCAATAAGCTTGCAGTGCGACTGCATTGTGAATTACCTGATGCCATTGTACGCCAAATACCCGATTGTGGTCACCTTCCTCATGTTGAAAGACCAGATTCTGTTGTCaaatttattgttgaatttgttCAGAGCAAAACCAAGGCAGAGAATCAATGTGTTTCACCGGTATGA 1029 0.414 MLLLLPPQFASQTRLPFPFPSTVKLKVVSEADAFPSFLPKEVHRIKDPFARSLAMRIQRLPVSVRFSENPIMSSFVKPLTQNKANPVVLLHGFDSSCLEWRYTYPLLEEAGFETWAVDILGWGFSDLEKLPSCDVVSKRDHIYQFWKSYIKREMILVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNVATLPRVAAYAGVYILKSIPLRLYANYLSFTNISFSTSLDWTNVGRLHCLLPWWEDATVDFMTSGGYNVASQIKKVKQKTLIIWGENDRIISNKLAVRLHCELPDAIVRQIPDCGHLPHVERPDSVVKFIVEFVQSKTKAENQCVSPV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1372 342 PANTHER ALPHA/BETA FOLD HYDROLASE 14 341 - -
Ssu5g1372 342 SUPERFAMILY alpha/beta-Hydrolases 83 329 IPR029058 -
Ssu5g1372 342 PRINTS Epoxide hydrolase signature 91 109 IPR000639 GO:0003824
Ssu5g1372 342 PRINTS Epoxide hydrolase signature 170 183 IPR000639 GO:0003824
Ssu5g1372 342 PRINTS Epoxide hydrolase signature 111 126 IPR000639 GO:0003824
Ssu5g1372 342 PRINTS Epoxide hydrolase signature 305 327 IPR000639 GO:0003824
Ssu5g1372 342 PANTHER HYDROLASE 14 341 - -
Ssu5g1372 342 Gene3D alpha/beta hydrolase 76 337 IPR029058 -
Ssu5g1372 342 Pfam Alpha/beta hydrolase family 87 322 IPR000073 -
Ssu5g1372 342 PRINTS Alpha/beta hydrolase fold signature 170 183 IPR000073 -
Ssu5g1372 342 PRINTS Alpha/beta hydrolase fold signature 156 169 IPR000073 -
Ssu5g1372 342 PRINTS Alpha/beta hydrolase fold signature 111 126 IPR000073 -
Ssu5g1372 342 PRINTS Alpha/beta hydrolase fold signature 274 288 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1372 Ssu-Chr5 44634295 44641605 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1372 5 44634295 44641605 Ssu2g1502 2 61860205 61868915 PCT