Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1370 ATGTCCACGGAGAAGGAGAGAGAGACCCAAGTTTATTTGGCCAAGCTCGCTGAGCAAGCCGAGAGATATGATGAAATGGTTGAGTGCATGAAGACAATAGCAAAACTTGATCTAGAGCTGACAGTGGAAGAAAGGAACCTGCTCTCGGTGGGatataaaaatgtgattggTGCACGGCGAGCCTCTTGGCGCATTATGTCTTCAATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAATGCAAAACTTATCAAGAATTACCGCCAAAAGGTCGAAGATGAACTATCCAAAATTTGCAGTGACATTCTCGCAATTATTGACCAGCATCTCGTTCCTTCTTCCACCTCAGGAGAAGCTACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTAAAGGGATATGAGGCCGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCTCCtgaaagGGCCTGTCATTTGGCCAAACAAGCTTTCGATGAGGCAATTGCAGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTGACTCTCTGGACCTCCGATTTACCTGAGGATGGAGGTGACGAAATCAAAACAGAAAAAGCCAAACCGGCTGAACCTGAGTCCTTGGCGGCAAAAAAGTTCAGCAGGGATGTTTAG 807 0.4387 MSTEKERETQVYLAKLAEQAERYDEMVECMKTIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKLIKNYRQKVEDELSKICSDILAIIDQHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEKAKPAEPESLAAKKFSRDV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1370 268 MobiDBLite consensus disorder prediction 237 268 - -
Ssu5g1370 268 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Ssu5g1370 268 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Ssu5g1370 268 Coils Coil 195 215 - -
Ssu5g1370 268 SMART 1433_4 7 248 IPR023410 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Ssu5g1370 268 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Ssu5g1370 268 Gene3D - 1 247 IPR036815 -
Ssu5g1370 268 PANTHER BNAC03G57490D PROTEIN 3 249 - -
Ssu5g1370 268 Pfam 14-3-3 protein 13 235 IPR023410 -
Ssu5g1370 268 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Ssu5g1370 268 MobiDBLite consensus disorder prediction 240 268 - -
Ssu5g1370 268 PANTHER 14-3-3 PROTEIN 3 249 IPR000308 -
Ssu5g1370 268 PIRSF 14-3-3 1 247 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1370 Ssu-Chr5 44617874 44621709 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1370 5 44617874 44621709 Ssu2g1506 2 61964773 61966557 PCT