Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0332 ATGGCGAATAACGAAAACGATGCTTGTTCCTTCACCGATTTCCCGGAGGACATTCAGGTGTGCATCCTCTCGTTCCTGGGCCCACCCGTGATCGCGACCCTGGCCTGCACCTCGAAGCGATTGGGCTCTCTGTGCGCCAGCGACTCCAAGCTGTGGTTGAGTATGTGCGAGCGCAGGTGGGGTTCCAAGACCCGCATCACCGAATGGGGGAGAGGCAAGGGAATAATCTCCTACAAGCACCTCTACAACACCCTCCACTGCTGGGAAGAAGACCTCCTGGGCTTCTGGCGCCGAATCGGCCCCGGAACCCGAAGCCCTTCGTTGCTCTTCTTCGAGTGGGGCCCATCCTTCGTTTCAGCCTCTAGGGTTTCCCCCTCCAGATCGGTCACCTACGGAGTCACCAAAACCCCGTTCCTCTGGATGAGCCTCTCCGAGGAGGGACACGTGGTCAGCTTTCTCGATTCCGACGGAAGACCCGGGGCTCAGAACAACGAATTGGTCGCGGTCGACGTCAGTTTCATGGGGAAGACGCACTTCGTCGTGGAGGAAAAGGATTCTAGGGGTTCGGTGAGCGGAGATGATTGTGGAGATGATGTGATGATGGAGAGTGGATCGCCGCCGGAGATTTACCAGCATTTCGCGAACCGGCGGAGTCCGGGCGGGGATCGGTGGAGGAGGCAGAGGCGGAGGGAGAAGGAGAGGCTGGCGAGGAGGAAATGGGAGCCTCAGCATTTTGTGAAGATCGTGTATTGCTCGCCGACGCCGGCGAGGCCCTTGCAGGGCCTCTGGAAGGGAATTTGTGATGACATGAGTTTGGCATTTTACCTTGTGGTATATGACGACATTGGGGGCATTGCCTGCCGGCGGATTGGGGACCCTCCAGAACGTTTTTCAGGATGTGCCCCTGTTTTCTGGACTTCAAATGCTACATTTCTGGAATCGCCCTTTTCTCCGGAAGAAGAATCTTTGTATGACAGTCGCATTCATCTTCGACCACTTCAACCGGGCAATGAAGTTCTTGAGCAGTTCCCTTTGTCGGACGGTGAAGTGGTGAATCAAATTCAGCAGTTCCGGTTGTCGGACAATGTGGTAAACCGAATTCTTCACATAAGCTCAAGTTATGATTTAGTTGTTCCAGACCTTGCTGGAACAATGAATCCAAGGAGTGCAGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTTGGATTCCTTTCGGACAATTTTGTCGTAGACATGAAACATATTGTCCACAATGGTTGTATTGTGGATACTGTAAATTCTTCTGCTGATTGA 1302 0.5338 MANNENDACSFTDFPEDIQVCILSFLGPPVIATLACTSKRLGSLCASDSKLWLSMCERRWGSKTRITEWGRGKGIISYKHLYNTLHCWEEDLLGFWRRIGPGTRSPSLLFFEWGPSFVSASRVSPSRSVTYGVTKTPFLWMSLSEEGHVVSFLDSDGRPGAQNNELVAVDVSFMGKTHFVVEEKDSRGSVSGDDCGDDVMMESGSPPEIYQHFANRRSPGGDRWRRQRRREKERLARRKWEPQHFVKIVYCSPTPARPLQGLWKGICDDMSLAFYLVVYDDIGGIACRRIGDPPERFSGCAPVFWTSNATFLESPFSPEEESLYDSRIHLRPLQPGNEVLEQFPLSDGEVVNQIQQFRLSDNVVNRILHISSSYDLVVPDLAGTMNPRSAEGRIWQYQNGTFGFGFLSDNFVVDMKHIVHNGCIVDTVNSSAD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0332 433 SUPERFAMILY F-box domain 3 89 IPR036047 GO:0005515
Ssu5g0332 433 ProSiteProfiles F-box domain profile. 8 55 IPR001810 GO:0005515
Ssu5g0332 433 Gene3D - 2 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0332 Ssu-Chr5 6982400 6984141 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0332 5 6982400 6984141 Ssu5g0332 5 6982400 6984141 ECH