Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0330 ATGCATACGCTGAACCCTTTTGTTTGTGGCACTTTCCATGACCAAGACGATGAAACATGTCTTGCAAGTCCTCTTTCTAGCCccagaaaatataaaagaaaagacagTAAGAACAACCCTTATTCCACTCGCGGCCTAGACAAGTTTTCTGAACTCTTGGCTGATCTCGATGAGAAGAGGCAGAAGATTTATTCACAGACGAACCCGCACGACATCTCTTTCGTTCGCTTTGTGTACTCCAACACAGATGATATTGTTCCTGTGGTGGTCAAGGTGAAAAACAACAAGGATCAGAGACACAAGAGCCAAGATCTCAAAGTGGTGAGAGCAAGAACGTTGACTCACACCTCAGAGTCAATGGAGAAGTCTGCAACGACTGATCAAAACCCTACTGAAGAAAGAAAGCAACCCAAGATAGAAACCGATGAAACAAAGGTAGCCAAGAAGAGATTTTCTTGGAACATAAAGAATTGGGATGTGGGGAAGCCTTCTTTCTATTTGCCAGTGGTCATGGTATTGATTTTGTTGCTCCTGACTTTGTTTGGAAGATCCGTTACGACCCTTTGCACGTGTATTTTGTGGTATGTGATTTCCACGTTGAAAGGGCAGCTCACCTAA 618 0.4223 MHTLNPFVCGTFHDQDDETCLASPLSSPRKYKRKDSKNNPYSTRGLDKFSELLADLDEKRQKIYSQTNPHDISFVRFVYSNTDDIVPVVVKVKNNKDQRHKSQDLKVVRARTLTHTSESMEKSATTDQNPTEERKQPKIETDETKVAKKRFSWNIKNWDVGKPSFYLPVVMVLILLLLTLFGRSVTTLCTCILWYVISTLKGQLT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0330 205 MobiDBLite consensus disorder prediction 127 141 - -
Ssu5g0330 205 MobiDBLite consensus disorder prediction 114 141 - -
Ssu5g0330 205 PANTHER ZCF37 4 203 IPR045880 -
Ssu5g0330 205 MobiDBLite consensus disorder prediction 23 44 - -
Ssu5g0330 205 PANTHER ZCF37 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0330 Ssu-Chr5 6959336 6959953 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0330 5 6959336 6959953 Ssu5g0330 5 6959336 6959953 ECH
Ssu5g0330 5 6959336 6959953 Ssu1g3699 1 93228546 93229295 PCT