Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g0321 | ATGGGCACTCCCAGCATTGCCTTTGGAGCAGAAACCAGCTACTCTACAAGTGTTGGCAAGTTTACGAAATACAATGCTGGTCTGTGCTTGAAAATGCCAAGTTCCAATGCTTCAGTAATTTTAGGTGATAAGGGAGACTCCATGAAGGTGTCATATTTGCACCAGCTAGATAGATTGAATGGGGGACCTGTTGTGGGAGAGATTAGCAGAAGGTTCTCTACAAATGAGAACACATTGACAGTTGGATGTTCATATGTGGTTGATCCTCAGACAGTTGTGAAGGCAAAGCTGAACAACCATGGCAACCTTGGGGCCTTATTGCAGCATGAGGTTACACGTAAGTCATTCTTGACAATCTCAGGTGCCTTTGAAACAAAGGATTTGGACAAGAGTCCCAAGTTTGGTTTCTCACTCTTGCTCAAGCCTTAA | 429 | 0.4406 | MGTPSIAFGAETSYSTSVGKFTKYNAGLCLKMPSSNASVILGDKGDSMKVSYLHQLDRLNGGPVVGEISRRFSTNENTLTVGCSYVVDPQTVVKAKLNNHGNLGALLQHEVTRKSFLTISGAFETKDLDKSPKFGFSLLLKP | 142 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g0321 | 142 | ProSitePatterns | Eukaryotic mitochondrial porin signature. | 85 | 107 | IPR001925 | GO:0005741|GO:0008308|GO:0098656 | |
| Ssu5g0321 | 142 | Gene3D | Porin | 1 | 141 | IPR023614 | - | |
| Ssu5g0321 | 142 | PANTHER | VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL | 1 | 142 | IPR001925 | GO:0005741|GO:0008308|GO:0098656 | |
| Ssu5g0321 | 142 | PANTHER | PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN | 1 | 142 | - | - | |
| Ssu5g0321 | 142 | Pfam | Eukaryotic porin | 3 | 135 | IPR027246 | GO:0005741|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu5g0321 | Ssu-Chr5 | 6783639 | 6784602 | Tandem |