Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0307 ATGAGGTCACCACCGATTTTCAACACCCTCCAAACCCTTCTCCTCCTGCTGATGATACTCTTTAGCAGCAGCAACACCGAAGCAGAAAAGCATACAATCCACCAGCCCAAAAAGACCTACATAATCCACATGGACAAGTCCACCATGCCCGCAACTTTCACCGACCACCTCAGCTGGTTCGACTCATCCCTCAAATCAGCATCCCCCTCCGCCGAGATCCTCTACACCTACAAACACGTGGCCCACGGCTTCTCCACCAGGCTCACTCCGCGAGAAGCAGACACACTCGCGAAACAACCCGGAATCCTCTCCGTCATTCCCGAACTCAGATACAAACTCCACACAACAAGAACCCCCGAGTTCCTCGGACTCGAAAAAACCACAACGCTCTTGCCCGCTTCAGAGCAACAGAGCCAGGTGGTCATCGGGGTCCTCGACACAGGCGTGTGGCCCGAGCTGAAAAGCCTCGACGACACGGGCCTCGGCCCGGTCCCAAGCACCTGGAAAGGCGAGTGCGAGACGGGGAACAACATGAACGCGTCGAGCTGCAACAAGAAACTCGTCGGAGCGAGGTTTTTCTCCAGAGGCTACGAAGCCGCTCTGGGAGCCATTGATTTGAGCACGGAGTCAAAGTCGGCGAGAGACGACGACGGGCACGGGAGTCACACGCTGACCACGGCAGCAGGTTCGGCGGTTCCCGAAGCTAGCCTCTTCGGTTTGGCGTCAGGGACGGCGCGAGGGATGGCCACGCAAGCGCGCGTGGCGGTTTATAAAGTGTGCTGGCTCGGTGGGTGCTTCACCTCCGACATAGCCGCAGGAATCGACAAGGCCATAGAAGATGGCGTCAATGTTTTATCCATGTCGATTGGGGGGAGTTTAATGGAATATTACAGGGACATAATTGCGATTGGTTCCTTCACGGCCACTTCTCACGGAATTCTAGTTTCCACGTCAGCAGGGAACGGTGGGCCCAGTCCAGGGAGTCTGTCCAACGTGGCACCGTGGATAACCACAGTGGGAGCGGGAACTATTGACCGTGATTTCCCCGCGTACATAACCCTCGGAACCGGGAAGACATACACTGGGGCATCCCTTTATAATGGTAAACCCTTGTCGGATTCGCCGCTTCCGCTTGTTTACGCTGGGAATGCGAGTAACTCTTCCGTGGGGTATCTTTGTTTACAAGATTCTCTGATTCCCGAAAAGGTTTTAGGGAAAATTGTGATATGTGAGAGAGGGGGGAATCCGAGGGTGGAAAAGGGTTTGGTGGTTAAGCTTGCGGGGGGTGCTGGAATGATTTTGGCGAACAATGAAGCGTTCGGAGAAGAGTTAGTTGCTGACCCTCATCTCCTCCCTGCTGTGTCTCTAGGCCAAAAATCCAGCCAGATTTTGAAGAACTACGTTTCCTCTTCTCCCAATCCAACCGCTAAAATTGCCTTCTTAGGGACCCATTTGGAGGTTCAACCTTCCCCAGTTGTAGCGGCTTTCAGCTCCAGAGGACCCAACCCTCTCACTCCGAAGATTCTCAAACCGGATTTAATAGCTCCCGGGGTCAACATTTTAGCAGGTTGGACCGGTGCGGTTGGACCAACCGGTTTGACCGTGGATAACAGACACGTCAGCTTCAACATAATTTCTGGAACATCCATGTCGTGCCCACATGTGAGTGGCTTAGCCGCGATTCTCAAAGGGGCGCACCCTCAATGGAGCCCTGCTGCCATAAGGTCCGCACTCATGACCACGGCGTACGCGAGTTACAAAAACGGCGAAACAATTCAGGATGTCGCAACTGGACAACCTGCGACGCCGTTTGATTACGGCGCGGGACACGTGGATCCCGTGGCTGCCCTTGATCCTGGTCTCGTCTATGATGCCGACGTGGACGGCTACTTAAACTTCTTCTGCGCCTTGAACTACACGTCGTTTCAAATCAAGCTTGCCGCGAGGAGGGACTTTGCCTGTGACCCGAAGAAGGAGTACAGAGTGGAGGATTTTAATTACCCGTCGTTTGCGGTTCCTTTGGAAACAGCTTCGGGGATTGGGGGAGGTTCGGATGCTCCGAAGACTGTGAAATACTCTAGGGTTCTGACTAATGTGGGTGCAGCGGGAATATATAAAGCTTCGGTGTCGTCGGGGGCTTCGTCGGTGAAGATCGTGGTGGAACCGGAAACGCTGAGTTTCGCGGAGCTGTACGAGAAGAAGGGCTATACGGTGTCGTTTACGTACACTTCGATGCCGTCTGGCACGAGCAGCTTTGCACGTTTGGAATGGACGGATGGAAAGCATAGGGTTGTCAGTCCAATTGCGTTCAGCTGGACATGA 2322 0.5405 MRSPPIFNTLQTLLLLLMILFSSSNTEAEKHTIHQPKKTYIIHMDKSTMPATFTDHLSWFDSSLKSASPSAEILYTYKHVAHGFSTRLTPREADTLAKQPGILSVIPELRYKLHTTRTPEFLGLEKTTTLLPASEQQSQVVIGVLDTGVWPELKSLDDTGLGPVPSTWKGECETGNNMNASSCNKKLVGARFFSRGYEAALGAIDLSTESKSARDDDGHGSHTLTTAAGSAVPEASLFGLASGTARGMATQARVAVYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSLMEYYRDIIAIGSFTATSHGILVSTSAGNGGPSPGSLSNVAPWITTVGAGTIDRDFPAYITLGTGKTYTGASLYNGKPLSDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVLGKIVICERGGNPRVEKGLVVKLAGGAGMILANNEAFGEELVADPHLLPAVSLGQKSSQILKNYVSSSPNPTAKIAFLGTHLEVQPSPVVAAFSSRGPNPLTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDNRHVSFNIISGTSMSCPHVSGLAAILKGAHPQWSPAAIRSALMTTAYASYKNGETIQDVATGQPATPFDYGAGHVDPVAALDPGLVYDADVDGYLNFFCALNYTSFQIKLAARRDFACDPKKEYRVEDFNYPSFAVPLETASGIGGGSDAPKTVKYSRVLTNVGAAGIYKASVSSGASSVKIVVEPETLSFAELYEKKGYTVSFTYTSMPSGTSSFARLEWTDGKHRVVSPIAFSWT 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0307 773 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Ssu5g0307 773 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Ssu5g0307 773 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Ssu5g0307 773 SUPERFAMILY Subtilisin-like 113 621 IPR036852 GO:0004252|GO:0006508
Ssu5g0307 773 CDD PA_subtilisin_like 351 478 - -
Ssu5g0307 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Ssu5g0307 773 Gene3D Peptidase S8/S53 domain 140 630 IPR036852 GO:0004252|GO:0006508
Ssu5g0307 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Ssu5g0307 773 Gene3D - 634 772 - -
Ssu5g0307 773 SUPERFAMILY PA domain 371 439 IPR046450 -
Ssu5g0307 773 CDD Peptidases_S8_3 111 583 IPR034197 -
Ssu5g0307 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 771 IPR045051 -
Ssu5g0307 773 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Ssu5g0307 773 Pfam Fibronectin type-III domain 664 769 IPR041469 -
Ssu5g0307 773 Pfam PA domain 377 461 IPR003137 -
Ssu5g0307 773 Gene3D - 345 486 - -
Ssu5g0307 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 617 - -
Ssu5g0307 773 Pfam Subtilase family 138 609 IPR000209 GO:0006508|GO:0008236
Ssu5g0307 773 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0307 Ssu-Chr5 6495835 6498156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0307 7 773 Subtilisin-like Serine Gene Family AT5G67360 62.939 0.0 985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0307 5 6495835 6498156 Ssu5g0307 5 6495835 6498156 ECH
Ssu5g0307 5 6495835 6498156 Ssu1g3723 1 93603550 93605880 PCT