Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0300 ATGGAGCGGAAGCAAGGGTTCTTCTCCGCGCTGAAGGAGGAGGTGGTGCGCGGCCTCTCACCGGCGCGGTCACGCGCCAAGAGCCCCTCGAGGAGCGCATCGCCGATGTCCTCTCTGCTCCGGCGGCGCAGGAAGCAGCACGCACCGCCGCCGGAGCTCTTCATCGCGAGATCGGGAAGCCTGAGGCCCGCGGAGGCGCTCTCGCCGCTGAAGGAAGGCCCCGACGGAACCGACGCCGGAGAGTCCACGCGCGGAGAGGGAAGGTGGGGCCACTGGATGAAAGGACCACTTGCGAGAGCACCCTCTGTTTCCTCGTCCTCCTCGTCCTCTTCCGCGTGCAAAAAGTCCGATCTGAGGCTACTGCTTGGCGTGTTGGGCGCACCACTCGCCCCCGTGCACGTGTGCACCACGGACCCCTTCCCTCACCTCAGCATCAAAGACATCCCCATTGAGACTTCTTCTGCTCAGTACATACTGCAGCAGTACATTGCGGCTTCTGGAGGGCAGAAGCTGCAGAATTCGATTAACAATGCGTATGCCATGGGGAAGGTGAAGATGATAGCCTCCGAGTTTGAGACGGCGAACAAGGTCACCCGCAGCAGGAACTCCTCCAAGGCTGCCGAGTCTGGTGGGTTTGTCTTGTGGCAGATGAACCCGGACATGTGGTATGTGGAGCTTGCTCTTGGTGGCAGCAAGGTTCACGCGGGTTGCAATGGGAGACTGGTGTGGCGGCACACGCCCTGGCTCGGTGCACATGCCGCGAAAGGGCCGGTTCGGCCTTTGCGACGAGCCCTTCAGGGTCTTGATCCAAGAACAACTGCAAGTATGTTTATCAATGCAAGATGCATTGGGGAGAAGAAGATAAATGAAGAGGACTGTTTCATCCTCAAGCTTTGTGCAGACCCCTCAACATTAAAAGCCAGGAGTGAAGGCCCTGCAGAGATCATAAGGCATGTTTTGTTTGGGTACTTTAGCCAGAAAACGGGACTTCTTGTTCACTTGGAGGACTCCCATTTGACTCGCATTCAGAACAACGGCGGCGATGCAGTATATTGGGAGACCACAATAAATTCGTTTCTTGATGATTACAGACCCGTTGAGGGGATAATGATTGCTCACTCGGGTCGTTCTGTAGTGACACTTTTCAGGTTTGGGGAAACAGCAATGAGCCACACAAAAACCAGGATGGAAGAAGCTTGGACGATCGAGGAGGTTGCATTCAATGTCCCTGGCCTTTCCGTGGACTGTTTCATTCCTCCATCTGAGCTGAGGTTTGCTTCTATGAGTGAAGCTTGTGAGCTTCCTCAAGGTCAGAGGGTGAAGACTGCTGTGGCAGCAGCTGCATACCATGCCAAAGTTGCTCAACTGCAAAAATCGCATGAAAGCAACACCAATAACATTAACTGGACAGTGGATGTTTAG 1422 0.552 MERKQGFFSALKEEVVRGLSPARSRAKSPSRSASPMSSLLRRRRKQHAPPPELFIARSGSLRPAEALSPLKEGPDGTDAGESTRGEGRWGHWMKGPLARAPSVSSSSSSSSACKKSDLRLLLGVLGAPLAPVHVCTTDPFPHLSIKDIPIETSSAQYILQQYIAASGGQKLQNSINNAYAMGKVKMIASEFETANKVTRSRNSSKAAESGGFVLWQMNPDMWYVELALGGSKVHAGCNGRLVWRHTPWLGAHAAKGPVRPLRRALQGLDPRTTASMFINARCIGEKKINEEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDAVYWETTINSFLDDYRPVEGIMIAHSGRSVVTLFRFGETAMSHTKTRMEEAWTIEEVAFNVPGLSVDCFIPPSELRFASMSEACELPQGQRVKTAVAAAAYHAKVAQLQKSHESNTNNINWTVDV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0300 473 PANTHER LIPASE 1 472 - -
Ssu5g0300 473 PANTHER LIPASE 1 472 IPR006873 -
Ssu5g0300 473 MobiDBLite consensus disorder prediction 1 89 - -
Ssu5g0300 473 Pfam Protein of unknown function (DUF620) 179 420 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0300 Ssu-Chr5 6415512 6417524 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0300 5 6415512 6417524 Ssu5g0300 5 6415512 6417524 ECH