Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0291 ATGGCGGTCATGTCTGCCCTGTCATTTTTTTTGTGCGTTTTGCTAGCTGCCCGTGGTGGCTCAGGGGCAGTTCCTGAGGACATTTTCGTTCTGGCAGGACAGAGCAACATGGCTGGCCGAGGTGGTGTTATTGGGGGCAAATGGGACGGTGATGTCCCACCGGAGTGCAGGCCCGGCCCACGGGTTTTGAGGCTGAGTGCGAAGCTCGAGTGGGAGGAGGCGCGTGAGCCTCTGCATGCGGACATTGATGTGGGCAAGACATGTGGCGTTGGGCCCGGAATGGCTTTTGCGAACGAGGTTGTCAAAGTGAGTGGAGCTGGGTTTGTGGGCCTTGTCCCTTGCGCTGTGGGTGGGACCAAAATTGGACAGTGGAGTCGCGGGTCGCGGTTGTACAATCAGTTGGTGCAACGCGCGATTCGCGCAACGAGGGATGGTGGCGCAATTCGAGCGCTTCTTTGGTATCAAGGGGAGAGTGACACGGTGAGAGAAGAAGACGCGGAGGCTTATAAGGAGCAAATGGAGAGGTTTGTTATGGACCTTCGCTCAGATCTTCAGCTTCCGTCTCTCCTTGTTATCCAGGTAGCACTTGCATCAGGGGAAGGCAAGTTCACAGAGAAGGTGAGGCATGCTCAAATGGGAATCACATTGCCTAACGTCAAATGTGTGGATGCCAAGGGACTGCGTCTCAAGCCAGATAAACTTCACCTTACCACCATGTCTCAGGTTCACTTGGGCATTCGGTTAGCACGTGCCTATCTCGCTTCCACCACCACCCATCATTaccaatttattaattgtaacaTTAATCATACGCAAGTTTTAGCTAGCTGA 831 0.5307 MAVMSALSFFLCVLLAARGGSGAVPEDIFVLAGQSNMAGRGGVIGGKWDGDVPPECRPGPRVLRLSAKLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKVSGAGFVGLVPCAVGGTKIGQWSRGSRLYNQLVQRAIRATRDGGAIRALLWYQGESDTVREEDAEAYKEQMERFVMDLRSDLQLPSLLVIQVALASGEGKFTEKVRHAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVHLGIRLARAYLASTTTHHYQFINCNINHTQVLAS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0291 276 PANTHER OS06G0729725 PROTEIN 4 257 - -
Ssu5g0291 276 SUPERFAMILY SGNH hydrolase 27 261 - -
Ssu5g0291 276 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 4 257 - -
Ssu5g0291 276 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 26 253 IPR005181 -
Ssu5g0291 276 Gene3D SGNH hydrolase 24 256 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0291 Ssu-Chr5 6182204 6184425 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0291 5 6182204 6184425 Ssu5g0291 5 6182204 6184425 ECH
Ssu5g0291 5 6182204 6184425 Ssu1g3751 1 94115331 94120558 PCT