Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0276 ATGGGTCTAGTGATACATGTTGCGGTGGTGGCAGCCTCCTTGGGATGTGTTTCAGCCCTTTTGCTGGTTTTTATGTGGCGTTTGTGTCACCACAAGAAAAAGCACAGAAACTTTGTTGAAGCCAAAAGCTTGACCAGAATGGAGAGCCTCCAAGCAGGAATTGCAAGACTTCATCACCAACCAGTAATCCATCACCAATTTGATCACAAGAGCAAGAACAAAGGCAACTTTTATGTGTTTCATAACGGGGTCTCTAAAAGAGGACATTTGTTTAACTGGGATGATCATCCCTACCTTGTTGTTGATGCTGTGGAATATGGGTGGTCTAGATTTGCTTTTACTAACTACAAGAGCAACATGCCTTCTCCTTCAAAGAGATCAACCCTTTTAGGAGCATGTGCAGCTGGTGAATATGGAAGAGAAACTGAGGCTGAGATAAGCTGGGAAGTGTGTAATGGATCAGCTGAATACATGCAGATGATTAGGCTCAATCCTGGGTTGAAAAAGGTTCTTCACACAAACAACCCTTCCATGATGAGTGTTGCTTCTATCATTAGGACTGCTCTACCTCTTCCTGGCCCTCCTTTGGGGAACTATGCCTTCCCACAAGAAGCCTATTTTGAAATTACCATCTTGTGTTCTCGTGTTGATGATCGTGAACCGGTTGGGAAGAGAGAAGGGGAGAAGACAAAACTCCTCATTATTGAAGATAGTTCAAATGGTATAGGTGGTTTGGACATGGGTGAAGAAAGGAAACTTGACCATGAAGACGGTGGTGGAAAGAGTGGATCTGTGATGTTCTCATTGGGGTTGACAGCAGGAGGGGGTGTTCCTTTAAGAGTTCCAGGTAGCTACCCTCGGAGCATTGGGTTCAACTCCAATGGTTCTGTCTTTCTTGAAGGAATGAAACTTGTGATGGAGTCTGAGAAGGCACAGTGGGTAAGAACTGATAGGGTAATTGGGTGCGGGTTTGATCCCAGGcagaaaaaggttttctttACATTGGACTCAGACTTGGTGCATGTTATTCACTGCCAGTCAGAGGAATTCGCCACTCCTCTCTGTCCAACTTTGGCTGCAAATATAGACATTCTggttttagttaattttggaCAAAGTGCATTCAAATATGCACCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGGTGCTACCCTTGGCTATGATGACAGCAAGGAGCTCTTCTCCACGGGAAGGATTGATTCTCAGTGGCTTAATCGATCTGCAGCCAAAGGAAATCATAACAATGGGAATAATGCTGAAGCCTTAGATTTTGATGAGTCTGAGACTGATCTATTTGAAATAGTCTTGGATGGTTCAGAAAAGTCTCAAAACACAGTGTCATAG 1395 0.4315 MGLVIHVAVVAASLGCVSALLLVFMWRLCHHKKKHRNFVEAKSLTRMESLQAGIARLHHQPVIHHQFDHKSKNKGNFYVFHNGVSKRGHLFNWDDHPYLVVDAVEYGWSRFAFTNYKSNMPSPSKRSTLLGACAAGEYGRETEAEISWEVCNGSAEYMQMIRLNPGLKKVLHTNNPSMMSVASIIRTALPLPGPPLGNYAFPQEAYFEITILCSRVDDREPVGKREGEKTKLLIIEDSSNGIGGLDMGEERKLDHEDGGGKSGSVMFSLGLTAGGGVPLRVPGSYPRSIGFNSNGSVFLEGMKLVMESEKAQWVRTDRVIGCGFDPRQKKVFFTLDSDLVHVIHCQSEEFATPLCPTLAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPGATLGYDDSKELFSTGRIDSQWLNRSAAKGNHNNGNNAEALDFDESETDLFEIVLDGSEKSQNTVS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0276 464 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 4 460 - -
Ssu5g0276 464 PANTHER RAN BINDING PROTEIN 9-RELATED 4 460 - -
Ssu5g0276 464 Gene3D - 140 385 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0276 Ssu-Chr5 5787805 5789971 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0276 5 5787805 5789971 Ssu5g0276 5 5787805 5789971 ECH
Ssu5g0276 5 5787805 5789971 Ssu1g3765 1 94498671 94500675 PCT