Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0251 ATGGAAGACGGCGATGCGACGGAGGAGGCGGTTGTCGTGCCGGTCTCAAACTGCGACGGCGACGAGCAATTGTTTCCGCATTCCTCACGACATCGCGATTCGGAGGAGGAATCTCCGCACGAATTGTTGCGTAACACGAAGACTTCAATAGAGAACATCGTGGCCGAGATTCTCTCTCTCAAGAACAAGGGAAAACCCAAACCGCTCCTCACTCTCCGACTCAGAGAGATCCTCACTCAAACGTTCCTCCACTTCGTCACTCTCCGCCAGGCAAATCGCTCGATCTTGCTGGAGGAGGACCATGCGAGAAGGGAAACGGAGCGTGCGAAGGCGCCTTTGGAACTCACCACTCAGCAGCTTCATAACCTGGTGTACGAGAAGAGTCACTACGTGAAAGCGATAAAGGCCTGTAACGATTTCAAGTCAAAGTATGCCAATATTGAAGTGGTTTCGGAGGACGAGTTTTTTCGGGATGCGCCTCGGGATATGAAGGGCTCCGTTTTGTCCAATCACAGTGGACATAACCTCGTGCTTAAGAGACTCAATTTTGAGCTGTTCCAGCGCAAAGAGCTTTGCAAACATCATGACAAACTGGAACAGAAAAGGAAGACACTTCTGGAGACAATTGCAAACCGAAAGAAGTTCTTATCAAGTCTCCCTTCACAGCTCAAGTCTCTTAAGAAAGCATCATTACCGGTACAAAATCAACTAGGAGTTCAGCATGCTAAGAAACTAAAGTGGCATCATTCAGCAGAGTTGCTTCCACCACCTCTTTATGTGATTTACTCCCAGCTGTTGGCTCAAAAGGAGGCGTTTGGAGGATCTATTGATGTGGAGATTATAGGAAGCATCAAAGATGCTCAGGCTTTTGCCTGCCATCAAACTCACAAAGACACTGGCACTTCCACCACTGTGGAGAGTCCCAAATTGGAAAATGATGAACCTGATGAAGAAGATGGTCAGAGACAGAGTAAAAGGCCAAGGAGGTTTCAAGGCAATGAGAGCCTTGACCAGACAGGAATATTTCAAATTCACCCACTTACTGTCAATCTCCATGTGTATGATGATGAGGTTTCTGATCTTGAGTCTGCAAAACTCATTACTCTGAAGTTTGAGTACTTGATGCAGTTGAATATTATATGTGTTGGAATCGAAGCATCTAATGATGGTCCTGAGAATGACATCTTATGCAATTTATTCCCTGATGACACAGGTCTTGAGCTTCCTCACCAGTCAGCTAAGCTCTGTGTCGGGGATGCTACAATGTTTAATGGTGATAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTGGCAGGCATTGATTTCTTGCCTGAGGTGGCTCCCTTGCTGCTTGCTAGCCGTGAAACTTCAGACAGCGGTGAATCAACCAAAGGTGAAGATGTCATTCCTAGTTTTTCACAATATCACCAGCAAAACCGGTTACAGACAGTTCTGCAGAAAATTCGCTCAAGGAGAAAAGCTCAGTTGGCTCTTCAATAA 1503 0.4644 MEDGDATEEAVVVPVSNCDGDEQLFPHSSRHRDSEEESPHELLRNTKTSIENIVAEILSLKNKGKPKPLLTLRLREILTQTFLHFVTLRQANRSILLEEDHARRETERAKAPLELTTQQLHNLVYEKSHYVKAIKACNDFKSKYANIEVVSEDEFFRDAPRDMKGSVLSNHSGHNLVLKRLNFELFQRKELCKHHDKLEQKRKTLLETIANRKKFLSSLPSQLKSLKKASLPVQNQLGVQHAKKLKWHHSAELLPPPLYVIYSQLLAQKEAFGGSIDVEIIGSIKDAQAFACHQTHKDTGTSTTVESPKLENDEPDEEDGQRQSKRPRRFQGNESLDQTGIFQIHPLTVNLHVYDDEVSDLESAKLITLKFEYLMQLNIICVGIEASNDGPENDILCNLFPDDTGLELPHQSAKLCVGDATMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLASRETSDSGESTKGEDVIPSFSQYHQQNRLQTVLQKIRSRRKAQLALQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0251 500 MobiDBLite consensus disorder prediction 315 332 - -
Ssu5g0251 500 PANTHER FMS INTERACTING PROTEIN 28 500 IPR019163 -
Ssu5g0251 500 MobiDBLite consensus disorder prediction 15 45 - -
Ssu5g0251 500 MobiDBLite consensus disorder prediction 24 44 - -
Ssu5g0251 500 MobiDBLite consensus disorder prediction 295 332 - -
Ssu5g0251 500 Pfam Fms-interacting protein/Thoc5 87 443 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0251 Ssu-Chr5 5279909 5282988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0251 5 5279909 5282988 Ssu5g0251 5 5279909 5282988 ECH
Ssu5g0251 5 5279909 5282988 Ssu1g3789 1 94932453 94933196 PCT