Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0246 ATGCTGGCTTTGCAGGCGGAGCAGAAGGCAATTCACATGTCTAATGAAGGTAACCTACCACTGAGTTGGGATCAGACTAGAAACATGCGAATTACTCACAAGGTTGTGTTAGAGAGCTTGAGAATGGCAAGCATTATATCATTCCCTTTCAGAGAAGCAATAGCTGATGTGGAGTACAAGGGGTTCCTAATACCAAAAGGGTGGAAAGCGATGCCTCTGTTCAGAAATATTCATCACAATCCTGAATTTTATCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTCGCACCAAAGCCCAATACTTTCATGCCATTTGGTAGTGGAGTACATGCCTGCCCCGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAGTTTAGGTGGGAAGTGGTAGGATCGCAGTGTGGGATTCAGTATGGCCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 507 0.4615 MLALQAEQKAIHMSNEGNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFYPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSQCGIQYGPFPLPLNGLPARCWRESTS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0246 168 PRINTS E-class P450 group I signature 73 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 PRINTS E-class P450 group I signature 114 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 PRINTS E-class P450 group I signature 104 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 PRINTS E-class P450 group I signature 33 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 3 163 - -
Ssu5g0246 168 SUPERFAMILY Cytochrome P450 4 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 Pfam Cytochrome P450 4 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 107 116 IPR017972 GO:0005506|GO:0016705
Ssu5g0246 168 Gene3D Cytochrome P450 1 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0246 168 PANTHER CYTOCHROME P450 26 3 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0246 Ssu-Chr5 5109948 5111624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0246 3 166 Cytochrome P450 AT3G19270 71.515 5.10e-84 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0246 5 5109948 5111624 Ssu5g0246 5 5109948 5111624 ECH