Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0236 ATGGAAACTACTCATCAGCACCAAAAGAACACAGAAAACGATGTGGCAAAGCAACAAATTGAAGTAGCAGCAGCACAGTTAAggcaagaaaataaacaagACCAAACATCATCACCACAATCTTCACCATCCTCTTCCCCTTCTCACGAGTTCTCCTTCACAATCTCTCTCCACCCCACATTCCCTGACAACCCCAGAGCCCCACCATCATCTCTTGCAGTCGATTTGTCTCCTGCTGATGACATTTTCTTCCATGGTCACTTGCTCCCTCTCCACCTCCTTTCACACCTCCCTTCATCATCACCTCGCTCTTCAACCAATTCCATGGACAGCTTCACCCTCCCCATCAGAGAGTTATTAGAAGATGAAAACCACCCCATTAAGGACAGTGGCAGCAGCAACAGCACCACCACCTCAGACAGCAATAGCAGCAGCAAAAGAGACCAagacagcaacaacaacatagGAAAAAAGGTACAAGGTAAgtccaaattttctttttcattatttggatTTACCAAAGGGCACAAAAGGTGCCAAGATAAGGAAGATAATAAAGTGAAGCACAAGAAGAAGCTCAGGTTTGAAGTGATCCATGCAATCAAAAAGTACTTGAGAATGGTCCGGCCGAGGATGCTTTTCAAAGgacaaagagagaaaattagAGCCCGTGGACAGTGCTATTCTTATTCAGGAAATGCAACTCCGAGAAACTTTAGTGGTTGGAGAGGACAATATTCAGCACCAGCATCAATGAGGACTTCTCCAACAAACAGTGGTCTCTTGATTGCAACCACATCTCTTCCTCCTCCTAGTGACAGTACCATGGAAGAGTTGCAAGCAGCCATTCAAGCTGCAATTGCTCACTGcaaaaattcaattacaaaagaAGATAAGCTCAAGTGCTGA 909 0.4081 METTHQHQKNTENDVAKQQIEVAAAQLRQENKQDQTSSPQSSPSSSPSHEFSFTISLHPTFPDNPRAPPSSLAVDLSPADDIFFHGHLLPLHLLSHLPSSSPRSSTNSMDSFTLPIRELLEDENHPIKDSGSSNSTTTSDSNSSSKRDQDSNNNIGKKVQGKSKFSFSLFGFTKGHKRCQDKEDNKVKHKKKLRFEVIHAIKKYLRMVRPRMLFKGQREKIRARGQCYSYSGNATPRNFSGWRGQYSAPASMRTSPTNSGLLIATTSLPPPSDSTMEELQAAIQAAIAHCKNSITKEDKLKC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0236 302 MobiDBLite consensus disorder prediction 25 59 - -
Ssu5g0236 302 MobiDBLite consensus disorder prediction 123 158 - -
Ssu5g0236 302 Coils Coil 13 33 - -
Ssu5g0236 302 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 4-RELATED 6 301 IPR039620 GO:0005886|GO:0019210
Ssu5g0236 302 MobiDBLite consensus disorder prediction 129 158 - -
Ssu5g0236 302 MobiDBLite consensus disorder prediction 25 72 - -
Ssu5g0236 302 PANTHER BRI1 KINASE INHIBITOR 1 6 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0236 Ssu-Chr5 4867408 4868316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0236 5 4867408 4868316 Ssu5g0236 5 4867408 4868316 ECH
Ssu5g0236 5 4867408 4868316 Ssu1g3804 1 95073367 95074233 PCT