Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0234 ATGGACACCAATGGCAATTGGGAGGATGAAGAGGACGAGGAGTTCGAGTTCTCACGGAATTATTTTCTGGCGAAGGAACTCGCCTCCTCGGCCAAGAAATCCAAACACAAGCTCACCGACATCAACGTCGTTGTTGAACAGGAACTGAGGGAAGCCGCATCGCAAATTGAACCCAAGCATGAAAACGAGATCGCTCTCTTAATGGATTCCTACAAAACTATGTATCCTGAATGGCTTCTCGCGCTAAGGTGTGGTTTTGGGCTTCTGATGTATGGCTTTGGATCCAAGAAGGCTCTGATTGAAGATTTTGCTTCAACGGCACTGGCTGAATATTCTGTAGTTGTCATTAATGGATATCTTCAGGCCATTAACTTGAAACAGgttGTGTTAGCTTTAGCTGAAGTTCTGTGGGACCAAATGAAAACTAAACGAAGGGTTTCCCATCGGGACTTACCCAAGAGCCAGCAACCATTCAATTCTCAATCCATGGAAGATCTTCTTGCATTTTTGGACCAAGTGGAAATAGAGGacaatgatttttttgtttgtgttgttaTTCACAATATTGATGGACCCGGATTTAGGGACTCTGAAACCCAACAATATCTTGCTCGACTAGCTGCTTGTGCCCAAATTCGTGTTGTTGCCTCCATTGACCATGTTAATGCTCCTCTGTTTTGGGACAAGAATATGGCTCACACACAGTTCAATTGGTGCTGGTATCATGTTCCTACTTTTGCCCCTTATAAGGTTGAAGGCATGTTTTATCCTCTGATTCTTGCACATGGCAGCGCCAACCAAACTGTCAAAACAGCTACTATAGTTTTGCTAAGTTTGACATGCAATGCCCAGAGTGTATTCAAAGTTCTTGCCGAACATCAACTCTCTCACCCTGACGAAGGAATGCCGATCAATGATCTCTACTCAGTCTGTCGAGAACGTTTCCTTGTTAGCAGTCAAGTTACGCTGAATTCTCATTTGACTGAATTTAAAGACCATGAGCTGGTCAAGATTAAGAAGGATTCTGATGGTCAAGATTGCTTGCACATCCCTCTGACAACAGAAGCACTTCAGAAGGTTGTGCTCGAGATCAATTAG 1098 0.429 MDTNGNWEDEEDEEFEFSRNYFLAKELASSAKKSKHKLTDINVVVEQELREAASQIEPKHENEIALLMDSYKTMYPEWLLALRCGFGLLMYGFGSKKALIEDFASTALAEYSVVVINGYLQAINLKQVVLALAEVLWDQMKTKRRVSHRDLPKSQQPFNSQSMEDLLAFLDQVEIEDNDFFVCVVIHNIDGPGFRDSETQQYLARLAACAQIRVVASIDHVNAPLFWDKNMAHTQFNWCWYHVPTFAPYKVEGMFYPLILAHGSANQTVKTATIVLLSLTCNAQSVFKVLAEHQLSHPDEGMPINDLYSVCRERFLVSSQVTLNSHLTEFKDHELVKIKKDSDGQDCLHIPLTTEALQKVVLEIN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0234 365 Pfam Origin recognition complex subunit 2 34 355 IPR007220 GO:0000808|GO:0005634|GO:0006260
Ssu5g0234 365 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 16 363 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0234 15 365 Core DNA Replication Machinery Family AT2G37560 64.205 1.18e-170 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0234 5 4813834 4817099 Ssu5g0234 5 4813834 4817099 ECH