Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0230 ATGGGTGGTGTCTTCTACCATGAAGAGCCACCAAACCACACCAAGAGATGCAAATGCCTTGTAGGGACTTTGAAAGAAGTATTTTCACACTGTCAAACTTTCACTCGAAGGCATTCAACTGCAAGCCTCGAGGAGGAGTGCCCCATCATTGATAAGGAACAAGAAGAGGTTGTCTTAGCAGTTAGAAGCCGGGCCATGGAAAAACAAAAGCACAAGCCAAACCCACTGACGGAACTGTATGTCACTCACACGATGGCACCACAAGCAAGGGTGGCAGTAGGCGATGAAGAATACGATGTTGGAGAAGAGTTTTTGTCAGTTAAAAGTTCTCTCTCGTGCTGCTCTTCTAGTGCTGTGAGTGGGGAAGCTTTTTACTCTGTGAAGACGAACCTGTCTAGATGTTCAAGCATGAGTGAGCTTGACGTCTCAGAATATTGGAGGCGTTCAATAATTCAAGAGTTTTGTCATTGCGAGGGATGGCCTTTTGGTCTGTGCCGTAAAGCAGTGTTACTTCCACCGCTGCCCAAGTCACCATCTGAGTCATGGTTGTCGCGTAAAATACAACGAAGTACCAGGGTTACctga 585 0.4632 MGGVFYHEEPPNHTKRCKCLVGTLKEVFSHCQTFTRRHSTASLEEECPIIDKEQEEVVLAVRSRAMEKQKHKPNPLTELYVTHTMAPQARVAVGDEEYDVGEEFLSVKSSLSCCSSSAVSGEAFYSVKTNLSRCSSMSELDVSEYWRRSIIQEFCHCEGWPFGLCRKAVLLPPLPKSPSESWLSRKIQRSTRVT 194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0230 194 PANTHER OS09G0460100 PROTEIN 3 193 - -
Ssu5g0230 194 PANTHER OS09G0460100 PROTEIN 3 193 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0230 Ssu-Chr5 4789361 4790048 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0230 5 4789361 4790048 Ssu5g0230 5 4789361 4790048 ECH
Ssu5g0230 5 4789361 4790048 Ssu1g3810 1 95155405 95156347 PCT