Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0224 ATGAACGAAGTAACAAAGCAAATCATTAAGCAAAATTCGGATTTTTTTCCAATCAAGCCCCACGAATATGGTCGGTTCCTAATAATTTCAATAGGCACCGGGACAGcgaaaaatgaggaaaaattcAATGCACAAATGGCAGCCACATGGGGGTTATTGGATTGGCTAACCCATAGTGGTACTACTCCCTTAATTGACGTTTTCACTCAATCCAGTGCAGATATGGTGGATTTCCATTTATCTGCTGTAACTCAAGCACTTCGTTCAGAAGATAATTACCTTCGAATACAGGATGACACATTGACTGGAACAGATTCTTCAGTTGACATTGCTACAAAGGAGAACTTGGAGAAACTTTGCCAAATTGGAGAAAATCTGTTAAAGAAACCAGTCTCTAGGGTCAATTTAGAGAATGGTCTCTTTGAGCCACTCAAACATGGGGAAACCAATGAAGATGCTCTCAAAAGTGTGAAAATGTAa 480 0.3812 MNEVTKQIIKQNSDFFPIKPHEYGRFLIISIGTGTAKNEEKFNAQMAATWGLLDWLTHSGTTPLIDVFTQSSADMVDFHLSAVTQALRSEDNYLRIQDDTLTGTDSSVDIATKENLEKLCQIGENLLKKPVSRVNLENGLFEPLKHGETNEDALKSVKM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0224 159 SUPERFAMILY FabD/lysophospholipase-like 3 139 IPR016035 -
Ssu5g0224 159 PANTHER XYLOSE ISOMERASE 1 156 - -
Ssu5g0224 159 PANTHER PATATIN 1 156 - -
Ssu5g0224 159 Gene3D Cytosolic phospholipase A2 catalytic domain 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0224 Ssu-Chr5 4684825 4685880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0224 1 154 Miscellaneous Gene Families AT2G26560 62.338 3.78e-63 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0224 5 4684825 4685880 Ssu5g0224 5 4684825 4685880 ECH