Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0222 ATGGATCAAACAACGAAAGGATCTGTATCTCTAACTCCATGTGATGATGGACACCTGGTTACCGTTCTTAGCATTGATGGGGGCGGCATTCGGGGAATCATTCCAGGAATCATACTTGGTTTCCTGGAATCAGAGCTTCAGTGTAACGGTACCGAATATTGGTGCAGCAATTTATTCTCATCTATCGTGAAGTTCAGCAGAACTCTGTTTGGACCACAGTACAACGGCAAGTATTTACACAGGCTTACTAGGGAAAAATTAGGAGACACAAAATTGCACCAAACATTGACCAATGTGGTCATCCCAGCATTTGACATCAAGCGCCTTCAACCGACCATCTTTTCCAGCTTCCAGGCGCTGGTAGCCATTGCGGAAGTGACGAACCAAATTAGCCATGATGGGCCATGTGATAGCTTAAATGTGGAACCGATGCAATACGACCGGTTTTTGGTGATATCGTTGGGAACAGGCTCTCAGAAACAGGAAATGAAATACAGTGCTGATGAGGCAGCACAATGGGGTATCTTAAGTTGGGTAGCCACAACCAATGGTGGCACCCCTTTAATTGATGCCTTTAGTCACGCCAGTGCTGACATGGTTGATTTTCACATCTCCTCCGTTGTTCGAGCACTCAATTCTGAACACAACTACCTACGAATCCAGGACGATACATTAACTGGGGACTTATCTTCGGTAGACTTGGCCACGGAGAAGAATTTGAATGATCTCGTCAAAGTTGGGGAATCATTGTTAAAGAAACCGGTTTCTAAGATTAACTTGAAGACCGGCATTTACGAACCTGCTAAATATTATGAAACAAACGAAGAAGCTCTGAAGAGGTTTGCGGGAAGACTGTCCAGACAGAAACGATTTCGCAAATCTCAAATGTCTGCCAATGGGCATCTTTAG 909 0.4455 MDQTTKGSVSLTPCDDGHLVTVLSIDGGGIRGIIPGIILGFLESELQCNGTEYWCSNLFSSIVKFSRTLFGPQYNGKYLHRLTREKLGDTKLHQTLTNVVIPAFDIKRLQPTIFSSFQALVAIAEVTNQISHDGPCDSLNVEPMQYDRFLVISLGTGSQKQEMKYSADEAAQWGILSWVATTNGGTPLIDAFSHASADMVDFHISSVVRALNSEHNYLRIQDDTLTGDLSSVDLATEKNLNDLVKVGESLLKKPVSKINLKTGIYEPAKYYETNEEALKRFAGRLSRQKRFRKSQMSANGHL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0222 302 PANTHER PATATIN 9 58 - -
Ssu5g0222 302 PANTHER PATATIN 59 118 - -
Ssu5g0222 302 PANTHER XYLOSE ISOMERASE 9 58 - -
Ssu5g0222 302 PANTHER XYLOSE ISOMERASE 59 118 - -
Ssu5g0222 302 SUPERFAMILY FabD/lysophospholipase-like 20 277 IPR016035 -
Ssu5g0222 302 PANTHER PATATIN 119 297 - -
Ssu5g0222 302 PANTHER XYLOSE ISOMERASE 119 297 - -
Ssu5g0222 302 Gene3D Cytosolic phospholipase A2 catalytic domain 53 119 - -
Ssu5g0222 302 Gene3D Cytosolic phospholipase A2 catalytic domain 120 298 - -
Ssu5g0222 302 Gene3D Cytosolic phospholipase A2 catalytic domain 13 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0222 Ssu-Chr5 4641786 4645242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0222 11 292 Miscellaneous Gene Families AT2G26560 41.753 5.42e-84 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0222 5 4641786 4645242 Ssu5g0222 5 4641786 4645242 ECH