Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0218 ATGTGGTTAACAGCGAAACCCATGCGACAACTATGGTTCCCACTCCCAATCCCAGTCTCAGATTGCAGGTTATCCACAACAGCAACAAGCAGCACCAACACGATCATGGGAATTACTACTACTCTCACTCACTCTCACACTCCTACTCCTAAGCCTAAACCTAAGTCGACGGTAAAGCCTAAGAGGAAGAGGTATCGGAAGCTGTACCCTGGAGAGACCACCGGCATCACCGAAGAGATGAGGTTCGTCGCCATGAGGCTCCGCAACGTCACTGTTTCTGAAGACCAATCACTTTCCGACACGTGGCAGCCCTCCGTGGAAGGCTTCCTCTGTTACCTCGTTGACAGCCACCTCGTTTTCGCCACCCTCCAACGCGTCGTCGACGAATCCGACAACGTTTCTTATGCATACATGAGGAAGACTGGGTTGGAAAGATCAGAAGGGCTATTGAAGGATCTGGAATGGTTGGAGGAAGAAGGAAATGAGATTCCGAATCCCAGTTCTCCAGGGCTTACATATGCCAAATATTTGGAGGAACTTTCAGAGAAAAGTGCACCCTTGTTTCTCTCCCATTTCTATAATATCCATTTTTCTCATATAGCTGCTGGTCAGGTCATTGCAAAGAAGGTTTCTGAAAAGCTCTTGGAAGGTAAGGAGCTAGAGTTTTACAGATGGGAAGGAGATGTACCTGAAATGTTGAAAGGTGTTCGTGATAAGCTCAACATGCTTTCAGAGCATTGGTCTCGGGATGAAAAGAATAGATGTTTAAAAGAAACTACAAAGGCATTCCGGTATATGGGACAGATTGTTCGTCTTATTGTCTCATAA 828 0.4638 MWLTAKPMRQLWFPLPIPVSDCRLSTTATSSTNTIMGITTTLTHSHTPTPKPKPKSTVKPKRKRYRKLYPGETTGITEEMRFVAMRLRNVTVSEDQSLSDTWQPSVEGFLCYLVDSHLVFATLQRVVDESDNVSYAYMRKTGLERSEGLLKDLEWLEEEGNEIPNPSSPGLTYAKYLEELSEKSAPLFLSHFYNIHFSHIAAGQVIAKKVSEKLLEGKELEFYRWEGDVPEMLKGVRDKLNMLSEHWSRDEKNRCLKETTKAFRYMGQIVRLIVS 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0218 275 CDD HemeO 75 273 IPR002051 GO:0004392|GO:0006788
Ssu5g0218 275 Pfam Heme oxygenase 119 271 IPR016053 GO:0004392|GO:0006788
Ssu5g0218 275 Gene3D - 80 275 IPR016084 -
Ssu5g0218 275 PANTHER INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED 38 274 - -
Ssu5g0218 275 SUPERFAMILY Heme oxygenase-like 101 273 IPR016084 -
Ssu5g0218 275 PANTHER HEME OXYGENASE 1, CHLOROPLASTIC-RELATED 38 274 IPR016951 -
Ssu5g0218 275 MobiDBLite consensus disorder prediction 41 62 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0218 Ssu-Chr5 4571602 4574765 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0218 5 4571602 4574765 Ssu5g0218 5 4571602 4574765 ECH