Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0204 ATGAAACTAAAACCATTCATCTTCCCGAAACCTTTTCCAATTCCATcgctattttctttttctatgcaACGATGTTTCCCCTTCTCGACGTCCTCCACTCCCAGTCGCCACTCCTTCGACGACGTCGTTCCGGGTTGCAGCGCCGTTTACCGTCACGCCCTAAAATTCCAGCGCCCCGCGACTATTCGGTGGAGCCCACGCCTCGAGAACACCTCTAGCTTCATCGGCTCCATCACGCGCGGACCGGCGCGCGTCAACTCGAAAACCGGTAAGTTCGGAGTTCACACTCTGCTCAAGGTTCGAAGATCCAACCAACCAAATAGTTCCTCTTTCCGGTTGCTTTTGATGATGTGGAACAGTGTGGCGGAACTTGCTTCGGAACACTTGAAaccaaatgattttatttatgtttcagGTTCTTTGGGGTCTTACACTAAACCTGATGTCACTGGAATCCGTCGATTGTATTATAAGCTAGACGTGAAGGAGTTCAAGTTTGTGGCTCAAAGTTCTGGTTATCAAGGCCACAAGAAGTTGGAATCTGTTAAAGCTGAAGCTGGCATACAAAGTAACCAAAATCGGCTTTACCTTTGGCAAGTGTTTTTTGCCAATCCAAATGAGTGGTGGGATCAAAGAAAGCACAAATTTAATCCAAAGCAGCCTGATTTTAAGCACAAAGATACTGGTGAAGTTCTGTGGCTGAGTAAATATGATCCTCCATGGGTTAGAAGACAGCTCCAATTGCTTGACTCAAAAAGTGCTGGAGGAGGATCTGGAGGTCATCATTCTCGTGTCACCACTTGGGTTTATGATGAGTAG 819 0.4481 MKLKPFIFPKPFPIPSLFSFSMQRCFPFSTSSTPSRHSFDDVVPGCSAVYRHALKFQRPATIRWSPRLENTSSFIGSITRGPARVNSKTGKFGVHTLLKVRRSNQPNSSSFRLLLMMWNSVAELASEHLKPNDFIYVSGSLGSYTKPDVTGIRRLYYKLDVKEFKFVAQSSGYQGHKKLESVKAEAGIQSNQNRLYLWQVFFANPNEWWDQRKHKFNPKQPDFKHKDTGEVLWLSKYDPPWVRRQLQLLDSKSAGGGSGGHHSRVTTWVYDE 272
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0204 272 ProSiteProfiles Single-strand binding (SSB) domain profile. 68 168 IPR000424 GO:0003697
Ssu5g0204 272 MobiDBLite consensus disorder prediction 252 272 - -
Ssu5g0204 272 Gene3D - 65 168 IPR012340 -
Ssu5g0204 272 Pfam Single-strand binding protein family 71 166 IPR000424 GO:0003697
Ssu5g0204 272 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN 13 269 IPR011344 GO:0003697|GO:0006260
Ssu5g0204 272 SUPERFAMILY Nucleic acid-binding proteins 69 172 IPR012340 -
Ssu5g0204 272 PANTHER PROTEIN OSB1, MITOCHONDRIAL 13 269 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0204 Ssu-Chr5 4295860 4298607 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0204 5 4295860 4298607 Ssu5g0204 5 4295860 4298607 ECH