Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0202 ATGGCCCTAACGGACCTCTTCACCGGCGAGATCGCGTCCGACCTATGGAAAATGCTGATAACCATTTCCCGGAAGGCCCTCCGCTGCAAGTCCAGCGCGGAGCAACTCATCACCTACGTGCGCGAGCTCCTCCCGACGATCGAGGAGATAAAATACTCCGGCGTGGAGCTGCCGGCGCCGCGGCAGTCGCAGCTGGACCGGCTCTCGGAGATCCTGCGGTCCGGCGTGGAGCTGTCGCACCAGGCGCTCTCCTCGAGCCGCTGGAACGTGTACCGCAACTTCCAGCTAGCGAAGAAGATGGAGAAGCTGGAGAAGCACGTGACGAATTTCCTGCAGGTCCCCATGCAGGCGCACATACTGGCGGACGTGCAGCACGCGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGAGGATGGAGCGGTTTCTGGAGGGGATGAAGATCGGCGTGAACGGGGGCGGCTGGGTGGAGGAGGCCGTCAGGAGTATGCAGGAGGACGAGACGTGGGTCGATGGGTGTAATGGGAATTACGGTTTCGGGGTTGGCTTGGACTTCGGGAAGAACAAGCTTAAGGAGGTGGTTTTTTCGAGGCACGATCTTTGGGTTGTCGGGATTTGCGGGATTGGTGGGTCCGGGAAAACCACTCTCGCCAGAGAGGTCTGCAGAGACGACCAAGTACGGTGTAAGTTCACCCTCCCATTTTCATCATCTTTGAAGTTCAACATAAAATTGCGGTTACAAATATCACCGAACGCGTGA 774 0.5904 MALTDLFTGEIASDLWKMLITISRKALRCKSSAEQLITYVRELLPTIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTNFLQVPMQAHILADVQHARFEMAERFDRVEASNRRMERFLEGMKIGVNGGGWVEEAVRSMQEDETWVDGCNGNYGFGVGLDFGKNKLKEVVFSRHDLWVVGICGIGGSGKTTLAREVCRDDQVRCKFTLPFSSSLKFNIKLRLQISPNA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0202 257 Pfam NB-ARC domain 194 235 IPR002182 GO:0043531
Ssu5g0202 257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 235 IPR027417 -
Ssu5g0202 257 Gene3D - 189 249 IPR027417 -
Ssu5g0202 257 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Ssu5g0202 257 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Ssu5g0202 257 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 241 - -
Ssu5g0202 257 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 241 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0202 Ssu-Chr5 4273445 4274218 Wgd