Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0200 ATGGGCGAAGAGAGCCACCAGGCACCGCCACCGGTTCACGCACCGCCGGCAGGGCCACCGCCGCCGAATCTAGCACTCTCTAGGGGCCCCGTTTGGAATCCAGCTGAACAACTCTTGCAACTTCACTATTGCATCCACTCAAATCCTTCATGGCcGGAAGCCCTTCTACTGGGTTTTCAGCACTACATCGTGATGCTTGGAACAACGGTTCTGATTGCGACCACACTGGTTCCTGCAATGGGTGGGGACCATGGTGACAAGGCTCGTGTGATTCAGTCATTGTTGTTTATGTCTGGAGTGAACACACTGCTTCAGACTTGGTTCGGGTCGAGGCTTCCAACGGTGATGGGTGGATCAGTTGCTTTTTTTCTTCCAGTGTTGTCCATAATAAACGATTACACAGACAGGACGTTCCCTTCTGAGCATGAGAGGTTTACCTACACAATCAGAACAATTCAAGGATCCCTAATTGTTTCTTCTTTTGTCAATCTCTTCCTTGGGTATACTAAGACATGGGGAAATTTGACAAGGTTGTTTAGTCCCATAATCATTGTACCTGTGGTATGTTTGGTGGGTCTTGGTCTGTTCTCCAGGGGCTTTCCATTGCTTGCAAATTGTGTGCAGATTGGATTACCTATGCTTATTCTACTGGTCATAACGCAGCAGTATTTGAAGCGCATTCATCCTGCTGCTCATCCTGTAATTGAGAGGTTTGCTTTACTTCTCTGCATTGCTGTCATCTGGGCATTTGCTGCTATCCTTACTGTGGCTGGTGCATACAATACTGCTAAACCACAGACCCAAGTGAGTTGTCGCACAGATCGCTCGTATCTTATGTCTTCTGCTCCTTGGATTAAAGTTCCATATCCATTCCAGTGGGGTACCCCCATATTCAGAGCTAGTCATGTCTTTGGGATGATGGGGGCAGCGCTTGTTTCTTCTGCTGAGTCAACTGGTGCTTTCTTTGCTGCAGCCAGACTTTCTGGTGCAACACCACCGCCTGCACATGTGCTCAGTCGAAGCATCGGGATGCAGGGCATTGGCATGCTGCTTGAAGGCATATTTGGTTCTGTTGTTGGTACTACTGTATCTGTTGAAAATATTGGCCTACTTGGTCTAACGCATATAGGGAGCCGAAGAGTAGTGCAAATATCGTGCGGTTTTATGatcttcttctctatttttgGGAAATTTGGAGCCTTTTTTGCATCAATTCCCCTACCGATATTTGCTGCTATATACTGTGTTTTATTTGGTATTGTGGCTGCTGTTGGGATTTCTTTTATACAGTTTGCAAATAACAATTCCATAAGAAATATCTATGTTTTGGGCCTAACCTTGTTTCTTGGGATCTCAATAACACAATATTTTGTCATGAACACTGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGGTTTAATGACATTCTGAACACCATATTCTCTTCTCCCCCGACTGTGGCTATAATCGTTGGGACAATTATTGACAATACACTTGAAGCCAAAAAGACAGCTGTGGACAGAGGACTTCCATGGTGGGGTCCTTTCCAGAATAGGAAGGGAGATGTTAGAAATGATGAGTTCTACCGTCTTCCTCTCAGGATAAATGAGTATATACCCACCAGATTTCTCTAA 1644 0.4513 MGEESHQAPPPVHAPPAGPPPPNLALSRGPVWNPAEQLLQLHYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATTLVPAMGGDHGDKARVIQSLLFMSGVNTLLQTWFGSRLPTVMGGSVAFFLPVLSIINDYTDRTFPSEHERFTYTIRTIQGSLIVSSFVNLFLGYTKTWGNLTRLFSPIIIVPVVCLVGLGLFSRGFPLLANCVQIGLPMLILLVITQQYLKRIHPAAHPVIERFALLLCIAVIWAFAAILTVAGAYNTAKPQTQVSCRTDRSYLMSSAPWIKVPYPFQWGTPIFRASHVFGMMGAALVSSAESTGAFFAAARLSGATPPPAHVLSRSIGMQGIGMLLEGIFGSVVGTTVSVENIGLLGLTHIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAAVGISFIQFANNNSIRNIYVLGLTLFLGISITQYFVMNTAPDGHGPVRTDGGWFNDILNTIFSSPPTVAIIVGTIIDNTLEAKKTAVDRGLPWWGPFQNRKGDVRNDEFYRLPLRINEYIPTRFL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0200 547 MobiDBLite consensus disorder prediction 9 27 - -
Ssu5g0200 547 MobiDBLite consensus disorder prediction 1 27 - -
Ssu5g0200 547 Pfam Permease family 54 457 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu5g0200 547 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 5 545 - -
Ssu5g0200 547 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 5 545 IPR029943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0200 Ssu-Chr5 4257581 4264055 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0200 5 4257581 4264055 Ssu5g0200 5 4257581 4264055 ECH