Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0192 atgcaCAAATTTCACGATTCCTACCTGATCTCTCTTTTTCAGGTCAATAAAAAGACCGCGCTCTTCAATAGTCTCTGGTCAGCACCTACATACCATACCATTCAACTTTTGTCTATAAATAATCCCACTCGCCCCCCATTGCAtcatcaaaccaaacaatcccTCTCACCCACCAGCAGCACCAAATACCGAAGAAACGCTGAAACACCCACATTCTACAACCTTCCCATGGCATCTTCCACGCTGTCCTCTCCATTCCTGCGACTAGAATTTCCCTCCACGAGAAAACGCTCTTCAATCAAGGTTCCCTCGATCAGAGCCTCGGTGTCCGAAAAACCATTACCGTCCGTGTCGGTGACCGCGCCAGAACCCAGCAAGCTCCCGATCCGCAAAATCCCCGGTGACTGTGGGTTCCCGGTCATCGGCCCCTTCAAGGACCGCCAAGACTATTTCTACAACCAAGGCCGCGACGAGTTCTTCAAGTCCCGCATCCAAAAGTACCAGTCAACGGTCTTCCGCACCAACATGCCGCCTGGACCCTTCATCGCCCCCAACCCAAACGTCGTCGTTTTGCTCGACGGCAAGAGCTTCCCCGTCCTCTTCGACACGTCCAAGGTCGAGAAAAAGGACGTCTTCACCGGAACCTACATGCCCTCCACCGAACTCACCGGCGGCTACAGAGTCCTCTCCTACCTCGACCCCTCCGAACCCAAACACGCCCTTCTCAAGCAACTCATGTTCTTCCTCCTCAAATCCCGCCGCGGCCACGTCATCCCCGAGTTCCACGCGTCCTACAAAGAACTCTTCCACGCGCTCGAGACCGACCTCGCGGAAAAAGGCAAAGCCAGCTTCGGCGACGCCAATGACCAAGCCGCCTTCAACTTCTTGGGCCGGTCTCTCTTCGGGTCCAACCCCGCCGACACCAAACTAGGCCGCGACGGCCCAAAAATCGTTCAGAAATGGGTCCTCTTCCAGCTCGGCCCAATTCTCCGTTTGGGCTTCCCCCAGTTTCTGGAAGAGTCCACCGTCCGCATGTTCCGCCTCCCTCCCTTCCTCATCAAGAAAGACTACCAGAGACTCTACGATTTCTTCTACGAGTCCTCCGGGTTCGTGCTCGATGAAGCCGAGCGCTTGGGGATCACGCGCGACGAGGCTTGCCACAACTTGCTGTTCGCCACGTGCTTCAACTCCTTCGGCGGGATGAAGCTCTTTTTCCCGAACGTGTTGAAATGGATCGGGCGCGCCGGGGTGAAGCTCCACGCGCGGTTGGCGAACGAGATCCGCTCCGCCGTGAGATCCGCCGGCGGGGAGATCACCATGGCGGCGATGGAGAACATGCCGCTGATGAAGTCGGTGGTGTACGAGGCGTTCCGCATCGACCCGCCGGTGCCGCTGCAGTTCGGGAGGGCGAAGAGGGATTTGGTGATCGAGAGCCACGAGCACGCGTTTCAGGTGAAGGAAGGGGACATGTTGTTCGGGTACCAAGCTTTCGCGACGAAGGATCCTAAGATCTTCGAGCGGGCCGAGGAATTTGTCGGGGACAGGTTCGTGGGCGAGGAAGGGGAGAAGCTGCTCAAACACGTGCTCTGGTCCAACGGGCCTGAAACCGAGTCTCCCACCGTTGGGAACAAGCAATGCGCGGGGAAGGACTTCGTCACGTTGGTTTCTAGGCTTCTCCTTGTGGAGTTCTTTCTTCGTTACGACTCGTTTGAGATTCAAGTCGGAACTTCGCCCTTGGGTTCTGCCGTTACTATTACCTCGCTAAAGAGATCAAgcttttag 1782 0.5556 MHKFHDSYLISLFQVNKKTALFNSLWSAPTYHTIQLLSINNPTRPPLHHQTKQSLSPTSSTKYRRNAETPTFYNLPMASSTLSSPFLRLEFPSTRKRSSIKVPSIRASVSEKPLPSVSVTAPEPSKLPIRKIPGDCGFPVIGPFKDRQDYFYNQGRDEFFKSRIQKYQSTVFRTNMPPGPFIAPNPNVVVLLDGKSFPVLFDTSKVEKKDVFTGTYMPSTELTGGYRVLSYLDPSEPKHALLKQLMFFLLKSRRGHVIPEFHASYKELFHALETDLAEKGKASFGDANDQAAFNFLGRSLFGSNPADTKLGRDGPKIVQKWVLFQLGPILRLGFPQFLEESTVRMFRLPPFLIKKDYQRLYDFFYESSGFVLDEAERLGITRDEACHNLLFATCFNSFGGMKLFFPNVLKWIGRAGVKLHARLANEIRSAVRSAGGEITMAAMENMPLMKSVVYEAFRIDPPVPLQFGRAKRDLVIESHEHAFQVKEGDMLFGYQAFATKDPKIFERAEEFVGDRFVGEEGEKLLKHVLWSNGPETESPTVGNKQCAGKDFVTLVSRLLLVEFFLRYDSFEIQVGTSPLGSAVTITSLKRSSF 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0192 593 PANTHER CYTOCHROME P450 26 108 579 - -
Ssu5g0192 593 MobiDBLite consensus disorder prediction 42 63 - -
Ssu5g0192 593 Pfam Cytochrome P450 420 568 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 Gene3D Cytochrome P450 127 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 SUPERFAMILY Cytochrome P450 128 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 PRINTS E-class P450 group IV signature 446 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 PRINTS E-class P450 group IV signature 546 564 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 PRINTS E-class P450 group IV signature 499 517 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0192 593 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 108 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0192 Ssu-Chr5 4098644 4100425 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0192 5 4098644 4100425 Ssu5g0192 5 4098644 4100425 ECH