Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0188 ATGGCGGTTTCCCTATCGGCTCTCACAACTTCCCTCTCCTCACTCTCCTTCTCTTCCCACATTTCTCAGAGACCCAACACCCTCTCCTTCGCGAGAACCGAACCCTTCTCCCTCTCGCGCGTCCCCAAAATCCCCTCCCTCGTCGTGGCCGCAACAGCGCTCGCGGAACCGGAAACCGTGGACCTCAAGAAATACGTGAAGTCGAGGCTTCCAGGTGGATTCGCCGCTCAAACAATCATAGGCACCGGTCGCCGTAAGAGCGCCATCGCTCGCGTTGTCCTTCAGGAAGGGACCGGCAAATTCATCATCAATTACCGTGACGCCAAGGAATATCTTCAAGGAAATCCGTTGTGGCTTCAATACATTAAGGTTCCCTTAGTAACTTTGGGATATGAAAGTAATTATGATGTTTTTGTCAAAGCTGAGGGTGGTGGCCTGTCTGGTCAGGCTCAGGCAATCTCTCTTGGCATTGCTCGTGCCTTGCTGAAGGTGAGCGAAGATCATAGAGCACCTTTGAGACAGGAAGGACTTCTTACCAGAGATTCCAGAGTGGTTGAGAGGAAGAAAGTTGGTCTGAAGAAAGCTCGTAAAGCCCCTCAATATTCCAAACGTTGA 615 0.5138 MAVSLSALTTSLSSLSFSSHISQRPNTLSFARTEPFSLSRVPKIPSLVVAATALAEPETVDLKKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0188 204 Pfam Ribosomal protein S9/S16 83 204 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ssu5g0188 204 Gene3D - 70 204 IPR014721 -
Ssu5g0188 204 PANTHER RIBOSOMAL PROTEIN S9 60 204 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ssu5g0188 204 ProSitePatterns Ribosomal protein S9 signature. 143 161 IPR020574 GO:0003735|GO:0005840|GO:0006412
Ssu5g0188 204 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 60 204 - -
Ssu5g0188 204 SUPERFAMILY Ribosomal protein S5 domain 2-like 78 204 IPR020568 -
Ssu5g0188 204 Hamap 30S ribosomal protein S9 [rpsI]. 74 204 IPR023035 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0188 5 3800635 3803591 Ssu5g0188 5 3800635 3803591 ECH