Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0184 ATGGGGAACCAACTTTGCAGAGGAAGAAAATCAAGGTCCAAGAGAAGGCCAATGGGTTTCATTCATAATCAAGCTTCACCATCTCACACAGGGATAAGAACTGTGGGCGtggataaaatttgtaacttCTCCACTAATTCAGATCTTTGCATCTCCATAGTGACTTGGAATATGAATGGCCAGGTTACGTTTGAAGATTTAGCAGAAATGGTGGGTAGCAACCGCGAGTTTGATCTTCTAGCTGTTGGCTTGCAAGAGGCTCCTCCATGTCCACGAAACAAAGTCGCAACTCTGCTTTCAGCAGCTTTGGATGAAAGTCATACCCTGATAGGTAAAGTTATCATGCAATCTTTGCAGTTGTACCTGTTTGGGCCAAAGGATTCAGGATCGTTCATTAATGAATTGAAGGTAGACAAACAATCTGTGGGGGGCTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTGGCAATCCGCATTAACTACAAAGGCATTCGAATGGTGTTCATCTCGTGCCACCTCTCTGCTCATGCTCGCAATGTGGAGGAAAGAAATTCACAATGCAGGCATATATCACACTCCCTCTTTTCTAAGTTCTGGAACCCATATGGTAGACCATCCCATATTACTATTTGGTTAGGAGATCTAAACTACAGGCTTCAGGGGATTGATACATATCCTGCTAGAAGTTTAATAGAGAAAGACCTTCACCGGCGGTTGCATAGCAAAGACCAGCTCTTGCAAGAAGCTGGGCGAGGACAAATTTTCAACGGTTTCTGTGAGGGAACATTGACTTTCAAGCCAACGTATAAGTACAACAAAGGAAGTAGCAACTATGATACAAGTCACAAGgtGCGAGTGCCAGCATGGACAGACCGTATATTGTTCAAGATAGAAGACGAAAATAACATGGAAGCAACGCTACATTCATACGAGTCGATGGATGAAATCTACGGTTCTGATCATAAACCAGTTAAGGCACATCTCTGCTTAAGACTTAGTCAAATTCCAATAAGACCAAGTTGTAGTGAACAACAAACCTAG 1044 0.4243 MGNQLCRGRKSRSKRRPMGFIHNQASPSHTGIRTVGVDKICNFSTNSDLCISIVTWNMNGQVTFEDLAEMVGSNREFDLLAVGLQEAPPCPRNKVATLLSAALDESHTLIGKVIMQSLQLYLFGPKDSGSFINELKVDKQSVGGCGGIIGRKKGAVAIRINYKGIRMVFISCHLSAHARNVEERNSQCRHISHSLFSKFWNPYGRPSHITIWLGDLNYRLQGIDTYPARSLIEKDLHRRLHSKDQLLQEAGRGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSHKVRVPAWTDRILFKIEDENNMEATLHSYESMDEIYGSDHKPVKAHLCLRLSQIPIRPSCSEQQT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0184 347 SMART i5p_5 47 337 IPR000300 GO:0016791|GO:0046856
Ssu5g0184 347 PANTHER LD06095P 39 341 - -
Ssu5g0184 347 MobiDBLite consensus disorder prediction 1 25 - -
Ssu5g0184 347 Gene3D Endonuclease/exonuclease/phosphatase 30 346 IPR036691 -
Ssu5g0184 347 Pfam Endonuclease/Exonuclease/phosphatase family 54 322 IPR005135 GO:0003824
Ssu5g0184 347 SUPERFAMILY DNase I-like 38 333 IPR036691 -
Ssu5g0184 347 PANTHER INOSITOL 5-PHOSPHATASE 39 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0184 Ssu-Chr5 3660019 3664726 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0184 5 3660019 3664726 Ssu5g0184 5 3660019 3664726 ECH